RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 ACO2Q99798 780 aaKnown RBP10.82□□□□□ -0.68
LINC01090-202ENST00000434418 CCDC94Q9BW85 323 aaPredicted RBP10.82□□□□□ -0.68
LINC01090-202ENST00000434418 TARS2Q9BW92 718 aaKnown RBP10.82□□□□□ -0.68
LINC01090-202ENST00000434418 KMT5AQ9NQR1 393 aa10.82□□□□□ -0.68
LINC01090-202ENST00000434418 EPS15L1Q9UBC2 864 aa10.82□□□□□ -0.68
LINC01090-202ENST00000434418 DOCK6Q96HP0 2047 aa10.82□□□□□ -0.68
LINC01090-202ENST00000434418 SMIM28A0A1B0GU29 152 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 VWA3AA6NCI4 1184 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 CCL16O15467 120 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 MPOP05164 745 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 GLI4P10075 376 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 GJB2P29033 226 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 TKTP29401 623 aaKnown RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 OR1D2P34982 312 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 BRCC3P46736 316 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 RPL11P62913 178 aaKnown RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 ATP2C1P98194 919 aaPredicted RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 MESP2Q0VG99 397 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 ELAVL2Q12926 359 aaKnown RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 UPP1Q16831 310 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 PPM1LQ5SGD2 360 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 CD300LGQ6UXG3 332 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 RSPO2Q6UXX9 243 aaPredicted RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 CYP26C1Q6V0L0 522 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 C1orf186Q6ZWK4 172 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 APBB1IPQ7Z5R6 666 aaPredicted RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 GPR65Q8IYL9 337 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 SLC44A3Q8N4M1 653 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 PLEKHO2Q8TD55 490 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 THAP3Q8WTV1 239 aaPredicted RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 ZMAT2Q96NC0 199 aaKnown RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 TCHPQ9BT92 498 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 MRPL4Q9BYD3 311 aaKnown RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 ZNF552Q9H707 407 aaPredicted RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 HCFC1R1Q9NWW0 138 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 IGSF9Q9P2J2 1179 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 ARHGAP28Q9P2N2 729 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 ANKFY1Q9P2R3 1169 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 CA14Q9ULX7 337 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 TIMM13Q9Y5L4 95 aaPredicted RBP10.81□□□□□ -0.68
LINC01090-202ENST00000434418 CDY1Q9Y6F8 540 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 NUMBLQ9Y6R0 609 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 COL4A3Q01955 1670 aa10.81□□□□□ -0.68
LINC01090-202ENST00000434418 MYH11P35749 1972 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 H3BQV1 296 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 TMEM189-UBE2V1I3L0A0 370 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 ABLIM1O14639 778 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 LAMP2P13473 410 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 HTR4Q13639 388 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 RILPL1Q5EBL4 403 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 DCLRE1AQ6PJP8 1040 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 SCUBE1Q8IWY4 988 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 USP33Q8TEY7 942 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 C18orf25Q96B23 403 aaPredicted RBP10.8□□□□□ -0.68
LINC01090-202ENST00000434418 ZBTB45Q96K62 511 aaPredicted RBP10.8□□□□□ -0.68
LINC01090-202ENST00000434418 SNX27Q96L92 541 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 PTPRHQ9HD43 1115 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 TOPORSQ9NS56 1045 aaPredicted RBP10.8□□□□□ -0.68
LINC01090-202ENST00000434418 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC01090-202ENST00000434418 PPARGC1AQ9UBK2 798 aaKnown RBP10.8□□□□□ -0.68
LINC01090-202ENST00000434418 MTRRQ9UBK8 725 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 MRPS23Q9Y3D9 190 aaKnown RBP10.8□□□□□ -0.68
LINC01090-202ENST00000434418 KIF3AQ9Y496 699 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 TRAF6Q9Y4K3 522 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 CITO14578 2027 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 MYH15Q9Y2K3 1946 aa10.8□□□□□ -0.68
LINC01090-202ENST00000434418 CACNA1HO95180 2353 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 ZC3H12DA2A288 527 aaKnown RBP10.79□□□□□ -0.68
LINC01090-202ENST00000434418 PODXLO00592 558 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 C1RP00736 705 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 MCF2P10911 925 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 AOC1P19801 751 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 PROZP22891 400 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 CLCN5P51795 746 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 PLEKHN1Q494U1 663 aaPredicted RBP10.79□□□□□ -0.68
LINC01090-202ENST00000434418 PDXDC1Q6P996 788 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 PARM1Q6UWI2 310 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 ALKAL1Q6UXT8 129 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 ITFG1Q8TB96 612 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 ING5Q8WYH8 240 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 CDK5RAP3Q96JB5 506 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 UROC1Q96N76 676 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 ACAP3Q96P50 834 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 RPP25Q9BUL9 199 aaKnown RBP10.79□□□□□ -0.68
LINC01090-202ENST00000434418 CDH7Q9ULB5 785 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 PLA2G2DQ9UNK4 145 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 SIT1Q9Y3P8 196 aa10.79□□□□□ -0.68
LINC01090-202ENST00000434418 PDCD11Q14690 1871 aaKnown RBP10.78□□□□□ -0.68
LINC01090-202ENST00000434418 C22orf46C9J442 243 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 ANHXE9PGG2 379 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 TRAPPC3O43617 180 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 NTRK1P04629 796 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 HNRNPA1P09651 372 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC01090-202ENST00000434418 PLA2G4BP0C869 781 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 VIPR1P32241 457 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 MATR3P43243 847 aaKnown RBP eCLIP10.78□□□□□ -0.683e-8■■■■■ 27.9
LINC01090-202ENST00000434418 SLC12A3P55017 1021 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 ARPP19P56211 112 aa10.78□□□□□ -0.68
LINC01090-202ENST00000434418 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms