RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 CCDC175P0C221 793 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 CYP11B1P15538 503 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 EIF4A3P38919 411 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 NDST1P52848 882 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 BMS1Q14692 1282 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 MTF1Q14872 753 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 ZNF394Q53GI3 561 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 SPOUT1Q5T280 376 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 LETMD1Q6P1Q0 360 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 DCLRE1AQ6PJP8 1040 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 RAD9BQ6WBX8 426 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 IRF2BP2Q7Z5L9 587 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 SLC47A2Q86VL8 602 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 UNC93AQ86WB7 457 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 ZNF280BQ86YH2 543 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 TMEM86AQ8N2M4 240 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 TXLNBQ8N3L3 684 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 SPATA18Q8TC71 538 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 ASB11Q8WXH4 323 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 TIFAQ96CG3 184 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 SENP8Q96LD8 212 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 CHP1Q99653 195 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 DPH2Q9BQC3 489 aaPredicted RBP7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.3□□□□□ -1.245e-25■□□□□ 8.2
GTF2A1-202ENST00000434192 NT5C1AQ9BXI3 368 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 SDCBP2Q9H190 292 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 SNX25Q9H3E2 840 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 NRDE2Q9H7Z3 1164 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 SEPT11Q9NVA2 429 aaKnown RBP7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 DNAJB4Q9UDY4 337 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 HMGXB4Q9UGU5 601 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 DSEQ9UL01 958 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 BARX2Q9UMQ3 279 aaPredicted RBP7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 L1RE1Q9UN81 338 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 CNTN6Q9UQ52 1028 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 PRG3Q9Y2Y8 225 aaPredicted RBP7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 SLC4A7Q9Y6M7 1214 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 CHD9Q3L8U1 2897 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 REV3LO60673 3130 aa7.3□□□□□ -1.24
GTF2A1-202ENST00000434192 CHD7Q9P2D1 2997 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 ATP8B3O60423 1300 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 EYSQ5T1H1 3165 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 GRXCR1A8MXD5 290 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 A8MXQ7 604 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 EIF3CLB5ME19 914 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 M0QZQ0 153 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 NRP1O14786 923 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 ZSCAN12O43309 604 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 MED7O43513 233 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 GJB5O95377 273 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 PAEPP09466 180 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 CD19P15391 556 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 LAG3P18627 525 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 WARSP23381 471 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 BRCC3P46736 316 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 SLC11A1P49279 550 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 ST13P50502 369 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 CDH8P55286 799 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 BCAR1P56945 870 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 KRT83P78385 493 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 CDR2Q01850 454 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 ELAVL2Q12926 359 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 BTG3Q14201 252 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 STILQ15468 1287 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 SPA17Q15506 151 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 SLC18A3Q16572 532 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 SOWAHAQ2M3V2 549 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 TSNAXIP1Q2TAA8 658 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 TIGD5Q53EQ6 642 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 SFRP5Q5T4F7 317 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 TAF3Q5VWG9 929 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 TRIM72Q6ZMU5 477 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 TOGARAM2Q6ZUX3 1019 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 ZNF571Q7Z3V5 609 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 NOP9Q86U38 636 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 ZSCAN30Q86W11 494 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 METTL23Q86XA0 190 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 PDCL2Q8N4E4 241 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 LRRN4CLQ8ND94 238 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 OR6B3Q8NGW1 331 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 SLC20A1Q8WUM9 679 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 KBTBD7Q8WVZ9 684 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 RABGGTAQ92696 567 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 ZNF689Q96CS4 500 aaPredicted RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 TMEM176AQ96HP8 235 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 TNIP3Q96KP6 325 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 ZNF558Q96NG5 402 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 EIF3CQ99613 913 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 AGPAT1Q99943 283 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 MRPL45Q9BRJ2 306 aaKnown RBP7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 DESI2Q9BSY9 194 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 COLEC11Q9BWP8 271 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 PDCL3Q9H2J4 239 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 SPTLC3Q9NUV7 552 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 MARCH5Q9NX47 278 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 TJP2Q9UDY2 1190 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 VTI1BQ9UEU0 232 aa7.29□□□□□ -1.24
GTF2A1-202ENST00000434192 PUF60Q9UHX1 559 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms