RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 STILQ15468 1287 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 KYAT1Q16773 422 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 HSF5Q4G112 596 aaPredicted RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 KCNT2Q6UVM3 1135 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 ARMCX2Q7L311 632 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 ERO1BQ86YB8 467 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 CDKL3Q8IVW4 592 aaPredicted RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 ARID3BQ8IVW6 561 aaPredicted RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 NDUFAF2Q8N183 169 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 TTC39CQ8N584 583 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 AFG1LQ8WV93 481 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 USP6NLQ92738 828 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 E2F7Q96AV8 911 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 EBNA1BP2Q99848 306 aaKnown RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 DPEP3Q9H4B8 488 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 HESX1Q9UBX0 185 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 RPL26L1Q9UNX3 145 aaKnown RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 SCN1AP35498 2009 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 A6NJR5 290 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 DDNO94850 711 aaPredicted RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 IL1BP01584 269 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 DESP17661 470 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 PAX7P23759 505 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 MAGEA3P43357 314 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 LAMC2Q13753 1193 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 MTHFD1LQ6UB35 978 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 NUDCD3Q8IVD9 361 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.22□□□□□ -0.45
CD44-209ENST00000433892 UNC5BQ8IZJ1 945 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.22□□□□□ -0.45
CD44-209ENST00000433892 MCUQ8NE86 351 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 OR6B3Q8NGW1 331 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 GSDMBQ8TAX9 411 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 DCPSQ96C86 337 aaKnown RBP12.22□□□□□ -0.45
CD44-209ENST00000433892 LRRC39Q96DD0 335 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 SNTG2Q9NY99 539 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 TUBGCP4Q9UGJ1 667 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 MFHAS1Q9Y4C4 1052 aa12.22□□□□□ -0.45
CD44-209ENST00000433892 OTOFQ9HC10 1997 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 FAM159BA6NKW6 160 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 CXCL11O14625 94 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 GCATO75600 419 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 CCNFP41002 786 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 IRX4P78413 519 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 DPYSL2Q16555 572 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 ACSBG2Q5FVE4 666 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 MDH1BQ5I0G3 518 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 GLRA4Q5JXX5 417 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 ATG16L1Q676U5 607 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 MICAL1Q8TDZ2 1067 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 DEPDC1BQ8WUY9 529 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 WDR60Q8WVS4 1066 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 C18orf25Q96B23 403 aaPredicted RBP12.21□□□□□ -0.45
CD44-209ENST00000433892 C7orf26Q96N11 449 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 ANKRD27Q96NW4 1050 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 C20orf27Q9GZN8 174 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.21□□□□□ -0.45
CD44-209ENST00000433892 MTMR10Q9NXD2 777 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 SIRPGQ9P1W8 387 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 AP4E1Q9UPM8 1137 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 HES2Q9Y543 173 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 CITO14578 2027 aa12.21□□□□□ -0.45
CD44-209ENST00000433892 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.21□□□□□ -0.46
CD44-209ENST00000433892 ASB14A6NK59 587 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 KRT36O76013 467 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 NPTXRO95502 500 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 LMNAP02545 664 aaKnown RBP12.21□□□□□ -0.46
CD44-209ENST00000433892 PDGFRBP09619 1106 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 RARBP10826 455 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 LCP1P13796 627 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 CCDC130P13994 396 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 GRM5P41594 1212 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 CRADDP78560 199 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 OCRLQ01968 901 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 TMEM62Q0P6H9 643 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 TTLL12Q14166 644 aaPredicted RBP12.21□□□□□ -0.46
CD44-209ENST00000433892 RCN1Q15293 331 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 KIZQ2M2Z5 673 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 SOWAHAQ2M3V2 549 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 TEX44Q53QW1 395 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 TAPT1Q6NXT6 567 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 ZCCHC23Q6ZST2 131 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 DENND5BQ6ZUT9 1274 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 TREML1Q86YW5 311 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 PYROXD2Q8N2H3 581 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 CCDC185Q8N715 623 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 NETO2Q8NC67 525 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 MTBPQ96DY7 904 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 CSPG4P5Q96PW8 444 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 KCTD15Q96SI1 283 aaPredicted RBP12.21□□□□□ -0.46
CD44-209ENST00000433892 MROH8Q9H579 483 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 ARHGEF4Q9NR80 690 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 PIH1D1Q9NWS0 290 aaKnown RBP12.21□□□□□ -0.46
CD44-209ENST00000433892 SLC17A6Q9P2U8 582 aa12.21□□□□□ -0.46
CD44-209ENST00000433892 PPARGC1AQ9UBK2 798 aaKnown RBP12.21□□□□□ -0.46
CD44-209ENST00000433892 A8MXQ7 604 aa12.2□□□□□ -0.46
CD44-209ENST00000433892 LUC7L3O95232 432 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms