RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SAP30LQ9HAJ7 183 aa4.5□□□□□ -1.69
PTPN4-205ENST00000433888 ZIM2Q9NZV7 527 aa4.5□□□□□ -1.69
PTPN4-205ENST00000433888 SIRT4Q9Y6E7 314 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-205ENST00000433888 TRBV5-3A0A0A0MS03 114 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 SLC22A23A1A5C7 686 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 C4orf47A7E2U8 309 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 PRSS44E7EML9 344 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 FOXN3O00409 490 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-205ENST00000433888 PRPF3O43395 683 aaKnown RBP4.49□□□□□ -1.69
PTPN4-205ENST00000433888 SLC28A2O43868 658 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 TMIGD3P0DMS9 266 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-205ENST00000433888 RPS6KB1P23443 525 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 JAK3P52333 1124 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 WDR5P61964 334 aaKnown RBP4.49□□□□□ -1.69
PTPN4-205ENST00000433888 MANEAQ5SRI9 462 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 ZNF793Q6ZN11 406 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 YAF2Q8IY57 180 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 CINPQ9BW66 212 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-205ENST00000433888 PCDHA12Q9UN75 941 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 PROCRQ9UNN8 238 aa4.49□□□□□ -1.69
PTPN4-205ENST00000433888 A0A0G2JK05 382 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 ATG13O75143 517 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 NDUFB8O95169 186 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 TMEM225BP0DP42 221 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 MYF5P13349 255 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 IL6STP40189 918 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-205ENST00000433888 EPHB1P54762 984 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 ACOX1Q15067 660 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 CXorf57Q6NSI4 855 aaKnown RBP4.48□□□□□ -1.69
PTPN4-205ENST00000433888 MZT2AQ6P582 158 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 RBM44Q6ZP01 1051 aaKnown RBP4.48□□□□□ -1.69
PTPN4-205ENST00000433888 ADHFE1Q8IWW8 467 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 SUN3Q8TAQ9 357 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 APIPQ96GX9 242 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 FAM227BQ96M60 508 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 NLRP4Q96MN2 994 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 ARL8BQ9NVJ2 186 aa4.48□□□□□ -1.69
PTPN4-205ENST00000433888 A0A1W2PPC1 479 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 CTIFO43310 598 aaKnown RBP4.47□□□□□ -1.69
PTPN4-205ENST00000433888 SNX2O60749 519 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 T-ENOLP0DO92 83 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 RBL1P28749 1068 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 AASDHQ4L235 1098 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-205ENST00000433888 C18orf65Q6ZTR6 163 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 UNC13DQ70J99 1090 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 SMCR8Q8TEV9 937 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-205ENST00000433888 MSLNLQ96KJ4 702 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 AS3MTQ9HBK9 375 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 C1orf112Q9NSG2 853 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 MSRB1Q9NZV6 116 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 COG5Q9UP83 839 aa4.47□□□□□ -1.69
PTPN4-205ENST00000433888 HEMK1Q9Y5R4 338 aaPredicted RBP4.47□□□□□ -1.69
PTPN4-205ENST00000433888 EME2A4GXA9 379 aaPredicted RBP4.46□□□□□ -1.7
PTPN4-205ENST00000433888 CBFA2T3O75081 653 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 WDR47O94967 919 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 INMTO95050 263 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 PLA2G2AP14555 144 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 HOXB2P14652 356 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 ALDH7A1P49419 539 aaKnown RBP4.46□□□□□ -1.7
PTPN4-205ENST00000433888 RAE1P78406 368 aaKnown RBP4.46□□□□□ -1.7
PTPN4-205ENST00000433888 ZXDBP98169 803 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 GAB1Q13480 694 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 KCNJ12Q14500 433 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 ODF3L2Q3SX64 289 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 TTLL5Q6EMB2 1281 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 RFX8Q6ZV50 586 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 SLC44A5Q8NCS7 719 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 MBD3L2Q8NHZ7 208 aaPredicted RBP4.46□□□□□ -1.7
PTPN4-205ENST00000433888 ASB5Q8WWX0 329 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 LRTOMTQ8WZ04 291 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 ZNF479Q96JC4 524 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 ZPBPQ9BS86 351 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 SLCO5A1Q9H2Y9 848 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 MRPL44Q9H9J2 332 aaKnown RBP4.46□□□□□ -1.7
PTPN4-205ENST00000433888 MOV10Q9HCE1 1003 aaKnown RBP4.46□□□□□ -1.7
PTPN4-205ENST00000433888 ABHD10Q9NUJ1 306 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 ITGB1BP2Q9UKP3 347 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 HPSEQ9Y251 543 aa4.46□□□□□ -1.7
PTPN4-205ENST00000433888 TMEM272A0A1B0GTI8 110 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 PRYO14603 147 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 ST6GAL1P15907 406 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 ARRB2P32121 409 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 SOX2P48431 317 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 CARSP49589 748 aaKnown RBP4.45□□□□□ -1.7
PTPN4-205ENST00000433888 CACNB3P54284 484 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 SLC12A2P55011 1212 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 RHDQ02161 417 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 POLD3Q15054 466 aaPredicted RBP4.45□□□□□ -1.7
PTPN4-205ENST00000433888 PRTGQ2VWP7 1150 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 ZNF585BQ52M93 769 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 RNF220Q5VTB9 566 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 RFX6Q8HWS3 928 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 RAVER1Q8IY67 606 aaKnown RBP4.45□□□□□ -1.7
PTPN4-205ENST00000433888 PIGKQ92643 395 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 PPP1R10Q96QC0 940 aaKnown RBP4.45□□□□□ -1.7
PTPN4-205ENST00000433888 TUBB6Q9BUF5 446 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 LRRC27Q9C0I9 530 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 ZCWPW1Q9H0M4 648 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 DECR2Q9NUI1 292 aa4.45□□□□□ -1.7
PTPN4-205ENST00000433888 ZNF112Q9UJU3 913 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms