RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 STRNO43815 780 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ZC3H11AO75152 810 aaKnown RBP eCLIP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 COQ9O75208 318 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 PROSCO94903 275 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 DLDP09622 509 aaKnown RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 CA4P22748 312 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 GTF2H1P32780 548 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SHMT1P34896 483 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ETV4P43268 484 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ACTR3P61158 418 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 GCNT1Q02742 428 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ITGA9Q13797 1035 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 COG2Q14746 738 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 CNPY1Q3B7I2 92 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 OXLD1Q5BKU9 147 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 FAAH2Q6GMR7 532 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SEPT14Q6ZU15 432 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ACAD11Q709F0 780 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SPATC1Q76KD6 591 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 STRA8Q7Z7C7 330 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ZBTB33Q86T24 672 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TMPRSS6Q8IU80 811 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TPH2Q8IWU9 490 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 KBTBD2Q8IY47 623 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 FAM26EQ8N5C1 309 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 BANPQ8N9N5 519 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 PIP4K2CQ8TBX8 421 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 DPF3Q92784 378 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SLC5A5Q92911 643 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ZBED3Q96IU2 234 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 VCPIP1Q96JH7 1222 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 CLMNQ96JQ2 1002 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 C9orf72Q96LT7 481 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 GBP5Q96PP8 586 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 NACC1Q96RE7 527 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 NDNQ99608 321 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 HTATIP2Q9BUP3 242 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 AMNQ9BXJ7 453 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 TMEM117Q9H0C3 514 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 BCAS3Q9H6U6 928 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ZFYVE28Q9HCC9 887 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ARHGEF4Q9NR80 690 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 ARL8BQ9NVJ2 186 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 PPARGC1AQ9UBK2 798 aaKnown RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 SERPINB13Q9UIV8 391 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 PLA2G4CQ9UP65 541 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 R3HDM2Q9Y2K5 976 aaKnown RBP8.37□□□□□ -1.07
VTI1A-202ENST00000432306 HTTP42858 3142 aa8.37□□□□□ -1.07
VTI1A-202ENST00000432306 CAPN14A8MX76 684 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 FKBP6O75344 327 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 UPP2O95045 317 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 CYP1A1P04798 512 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MAPK4P31152 587 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 HOXD12P35452 270 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MAGEA8P43361 318 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MXI1P50539 228 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 GTF2BQ00403 316 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 DSG1Q02413 1049 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MAP3K10Q02779 954 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 SLC18A2Q05940 514 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 PRKD1Q15139 912 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MAPK6Q16659 721 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 RNASEH2BQ5TBB1 312 aaKnown RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 LRRC38Q5VT99 294 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 HHATQ5VTY9 493 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 SH2D5Q6ZV89 423 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MARK2Q7KZI7 788 aaKnown RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 CATSPER4Q7RTX7 472 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 ZC3H18Q86VM9 953 aaKnown RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 CPNE8Q86YQ8 564 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 CCNJLQ8IV13 435 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 RHOT1Q8IXI2 618 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 C7orf61Q8IZ16 206 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MCOLN2Q8IZK6 566 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 DAW1Q8N136 415 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 KLHL23Q8NBE8 558 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 WDR60Q8WVS4 1066 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 ATG4AQ8WYN0 398 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 NKD2Q969F2 451 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 ZNF669Q96BR6 464 aaPredicted RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 CENPKQ9BS16 269 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MAK16Q9BXY0 300 aaKnown RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MANSC1Q9H8J5 431 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 MRGBPQ9NV56 204 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 CHCHD3Q9NX63 227 aaKnown RBP8.36□□□□□ -1.07
VTI1A-202ENST00000432306 FZD1Q9UP38 647 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 SORCS3Q9UPU3 1222 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 ZHX2Q9Y6X8 837 aa8.36□□□□□ -1.07
VTI1A-202ENST00000432306 SSC5DA1L4H1 1573 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 DNAJC25-GNG10A0A024R161 153 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 A0A1W2PPC1 479 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 ATP2A1O14983 1001 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 BUD23O43709 281 aaKnown RBP8.35□□□□□ -1.07
VTI1A-202ENST00000432306 LIASO43766 372 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 SPAG7O75391 227 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 TM7SF2O76062 418 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 GNRH1P01148 92 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 KRT15P19012 456 aa8.35□□□□□ -1.07
VTI1A-202ENST00000432306 GALNSP34059 522 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms