RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 INVSQ9Y283 1065 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PCDHA5Q9Y5H7 936 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ASPMQ8IZT6 3477 aa9.93□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PLXND1Q9Y4D7 1925 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 LNP1A1A4G5 178 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ST8SIA5O15466 376 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CACNG3O60359 315 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ALDH1A2O94788 518 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ZNF202O95125 648 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 IRF1P10914 325 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 KRT13P13646 458 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TRIM21P19474 475 aaKnown RBP9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 RPL13P26373 211 aaKnown RBP9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 P2RY2P41231 377 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 KIF11P52732 1056 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CREB5Q02930 508 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 EDRF1Q3B7T1 1238 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PREPLQ4J6C6 727 aaPredicted RBP9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 EOGTQ5NDL2 527 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 BTBD8Q5XKL5 378 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 NAT16Q8N8M0 369 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TERB1Q8NA31 727 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 BAP1Q92560 729 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CYFIP2Q96F07 1278 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 FAXDC2Q96IV6 333 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 EDEM2Q9BV94 578 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 NACA2Q9H009 215 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 NMUR1Q9HB89 426 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ZDHHC4Q9NPG8 344 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MARK1Q9P0L2 795 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 DEC1Q9P2X7 70 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 HCN2Q9UL51 889 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 STARD13Q9Y3M8 1113 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ATP6V1DQ9Y5K8 247 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 USP3Q9Y6I4 520 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 NUP205Q92621 2012 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MYH10P35580 1976 aa9.92□□□□□ -0.82
CDC42-IT1-201ENST00000431803 A0A1W2PQH9 124 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TBC1D3BA6NDS4 549 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 J3QL48 77 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TRIM24O15164 1050 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CD58P19256 250 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ACO1P21399 889 aaKnown RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ATP5C1P36542 298 aaKnown RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ADAM9Q13443 819 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ANO4Q32M45 955 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MAP7D1Q3KQU3 841 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PPP1R26Q5T8A7 1209 aaPredicted RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 RNF43Q68DV7 783 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 KRT39Q6A163 491 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CCDC186Q7Z3E2 898 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CYP2U1Q7Z449 544 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TRMT11Q7Z4G4 463 aaKnown RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SCD5Q86SK9 330 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MIB1Q86YT6 1006 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ZNF276Q8N554 614 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ZNF513Q8N8E2 541 aaPredicted RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 EHBP1Q8NDI1 1231 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SEMA4DQ92854 862 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 JAKMIP2Q96AA8 810 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 LSM14BQ9BX40 385 aaKnown RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 DUSP16Q9BY84 665 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 FAM124BQ9H5Z6 455 aaPredicted RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CD248Q9HCU0 757 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 POLMQ9NP87 494 aaPredicted RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MAP10Q9P2G4 905 aa9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MYO18AQ92614 2054 aaKnown RBP9.91□□□□□ -0.82
CDC42-IT1-201ENST00000431803 WDFY3Q8IZQ1 3526 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 THADAQ6YHU6 1953 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CHD6Q8TD26 2715 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 A0A1W2PQF6 199 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TCRBV21S2A2A0A5A6 115 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 NEDD8-MDP1E9PL57 170 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 RARGP13631 454 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TYRP14679 529 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 PMLP29590 882 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 MXI1P50539 228 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GOLGA8FQ08AF8 430 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GOLGA8DPQ0D2H9 430 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 COBLL1Q53SF7 1204 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SPDYCQ5MJ68 293 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 C10orf76Q5T2E6 689 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 GRAMD4Q6IC98 578 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TTC30AQ86WT1 665 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ZC3H3Q8IXZ2 948 aaKnown RBP9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SMYD4Q8IYR2 804 aaPredicted RBP9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 TTC39CQ8N584 583 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 FRMD1Q8N878 549 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SLC4A11Q8NBS3 891 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 CCDC150Q8NCX0 1101 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 FBXL13Q8NEE6 735 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 HMGB4Q8WW32 186 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 RLN3Q8WXF3 142 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 EEF2KMTQ96G04 330 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 P2RY11Q96G91 374 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 SPACA7Q96KW9 195 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 ARID3AQ99856 593 aa9.9□□□□□ -0.82
CDC42-IT1-201ENST00000431803 BBS2Q9BXC9 721 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms