RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 GEN1Q17RS7 908 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 STPG1Q5TH74 334 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 GRAMD4Q6IC98 578 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 KLHL10Q6JEL2 608 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 ANKRD52Q8NB46 1076 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 RBBP8NLQ8NC74 664 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 UBA3Q8TBC4 463 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 CLEC4CQ8WTT0 213 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 TIGD1Q96MW7 591 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 EDEM2Q9BV94 578 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 FSCN3Q9NQT6 498 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 TMEM74BQ9NUR3 256 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 CACNA2D2Q9NY47 1150 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 CLIC5Q9NZA1 410 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 ARMCX3Q9UH62 379 aaPredicted RBP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 DNMT3LQ9UJW3 386 aa12.37□□□□□ -0.43
HDAC4-202ENST00000430200 AGO1Q9UL18 857 aaKnown RBP12.37□□□□□ -0.43
HDAC4-202ENST00000430200 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 TBC1D3BA6NDS4 549 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 YJEFN3A6XGL0 299 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 E7ENQ6 273 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 GFRA2O00451 464 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 HOXB2P14652 356 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 BRD2P25440 801 aaKnown RBP12.36□□□□□ -0.43
HDAC4-202ENST00000430200 SGSHP51688 502 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 BCAT1P54687 386 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 STX17P56962 302 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 NUCB2P80303 420 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 MORC3Q14149 939 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 ELF2Q15723 593 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 BTBD8Q5XKL5 378 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 PM20D1Q6GTS8 502 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 TMEFF1Q8IYR6 380 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 C12orf50Q8NA57 414 aaPredicted RBP12.36□□□□□ -0.43
HDAC4-202ENST00000430200 EDEM1Q92611 657 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 FAXDC2Q96IV6 333 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 KREMEN1Q96MU8 473 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 CNTNAP3BQ96NU0 1288 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 TSG101Q99816 390 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 CNTNAP3Q9BZ76 1288 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 VPS45Q9NRW7 570 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 FBXO10Q9UK96 956 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 STARD13Q9Y3M8 1113 aa12.36□□□□□ -0.43
HDAC4-202ENST00000430200 GIPC1O14908 333 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 XPO1O14980 1071 aaKnown RBP12.35□□□□□ -0.43
HDAC4-202ENST00000430200 SMC2O95347 1197 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 CAVIN2O95810 425 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 CD19P15391 556 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 KCNA4P22459 653 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 PLA2G4AP47712 749 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 DGKGP49619 791 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 RGS7P49802 495 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 ZNF132P52740 706 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 MFAP3P55082 362 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 APBA1Q02410 837 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 BST2Q10589 180 aaKnown RBP12.35□□□□□ -0.43
HDAC4-202ENST00000430200 USP39Q53GS9 565 aaKnown RBP12.35□□□□□ -0.43
HDAC4-202ENST00000430200 EOGTQ5NDL2 527 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 TMEM215Q68D42 235 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 CYP2U1Q7Z449 544 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 DENND1CQ8IV53 801 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 TRIM59Q8IWR1 403 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 FAM217AQ8IXS0 508 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 ZNF276Q8N554 614 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 DEFB119Q8N690 84 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 CCDC150Q8NCX0 1101 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 WFDC5Q8TCV5 224 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 NELFBQ8WX92 580 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 SORCS1Q8WY21 1168 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 MYEOVQ96EZ4 313 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 GABRG3Q99928 467 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 MARCH2Q9P0N8 246 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 SFMBT1Q9UHJ3 866 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 LSM7Q9UK45 103 aaKnown RBP12.35□□□□□ -0.43
HDAC4-202ENST00000430200 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
HDAC4-202ENST00000430200 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.35□□□□□ -0.43
HDAC4-202ENST00000430200 CHD6Q8TD26 2715 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 DMXL2Q8TDJ6 3036 aa12.35□□□□□ -0.43
HDAC4-202ENST00000430200 IGHV1OR15-9A0A0B4J2B8 117 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 SLC12A8A0AV02 714 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 GOLGA6L4A6NEF3 574 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 CDX4O14627 284 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 PSMA7O14818 248 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 STX10O60499 249 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 ZBED1O96006 694 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 SDHBP21912 280 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 ITPKAP23677 461 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 NTSR1P30989 418 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 IL12RB1P42701 662 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 DHPSP49366 369 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 PSEN1P49768 467 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 DAOAP59103 153 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 BECN1Q14457 450 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-202ENST00000430200 SGO2Q562F6 1265 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 PMF1Q6P1K2 205 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 TMEM270Q6UE05 265 aa12.34□□□□□ -0.43
HDAC4-202ENST00000430200 RRAGAQ7L523 313 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms