RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PENKP01210 267 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-203ENST00000430038 NTSR1P30989 418 aa17.94■□□□□ 0.46
CPSF4-203ENST00000430038 DHPSP49366 369 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-203ENST00000430038 TKTL1P51854 596 aa17.94■□□□□ 0.46
CPSF4-203ENST00000430038 PKDCCQ504Y2 493 aa17.94■□□□□ 0.46
CPSF4-203ENST00000430038 LSM14BQ9BX40 385 aaKnown RBP17.94■□□□□ 0.46
CPSF4-203ENST00000430038 WDR35Q9P2L0 1181 aa17.94■□□□□ 0.46
CPSF4-203ENST00000430038 AGO1Q9UL18 857 aaKnown RBP17.94■□□□□ 0.46
CPSF4-203ENST00000430038 CIZ1Q9ULV3 898 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-203ENST00000430038 CACNA1BQ00975 2339 aa17.94■□□□□ 0.46
CPSF4-203ENST00000430038 GIPC1O14908 333 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 STX10O60499 249 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 ALDH1A2O94788 518 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 HOXB2P14652 356 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 KCNA4P22459 653 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 CORO1AP31146 461 aaKnown RBP17.93■□□□□ 0.46
CPSF4-203ENST00000430038 FMO5P49326 533 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 PSEN1P49768 467 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 YWHAGP61981 247 aaKnown RBP eCLIP17.93■□□□□ 0.46
CPSF4-203ENST00000430038 GEN1Q17RS7 908 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 RNF43Q68DV7 783 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 IL31Q6EBC2 164 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 TTI2Q6NXR4 508 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 PGBD3Q8N328 593 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 KCNV2Q8TDN2 545 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 PIGKQ92643 395 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 TSG101Q99816 390 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 EDEM2Q9BV94 578 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 CACNA2D2Q9NY47 1150 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 CALCOCO1Q9P1Z2 691 aa17.93■□□□□ 0.46
CPSF4-203ENST00000430038 BCCIPQ9P287 314 aaKnown RBP eCLIP17.93■□□□□ 0.46
CPSF4-203ENST00000430038 ARMCX3Q9UH62 379 aaPredicted RBP17.93■□□□□ 0.46
CPSF4-203ENST00000430038 LSM7Q9UK45 103 aaKnown RBP17.93■□□□□ 0.46
CPSF4-203ENST00000430038 CACNA1EQ15878 2313 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 GOLGA6L4A6NEF3 574 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 YJEFN3A6XGL0 299 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 E7ENQ6 273 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 O00370 1275 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 SMC2O95347 1197 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 ZBED1O96006 694 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 RALAP11233 206 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 NDUFV2P19404 249 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 ITPKAP23677 461 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 DGKGP49619 791 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 NUCB2P80303 420 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 LRRC63Q05C16 580 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 TMEM215Q68D42 235 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 DENND1CQ8IV53 801 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 RBBP8NLQ8NC74 664 aaPredicted RBP17.92■□□□□ 0.46
CPSF4-203ENST00000430038 IPO4Q8TEX9 1081 aaKnown RBP17.92■□□□□ 0.46
CPSF4-203ENST00000430038 XPO6Q96QU8 1125 aaKnown RBP17.92■□□□□ 0.46
CPSF4-203ENST00000430038 GABRG3Q99928 467 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 FSCN3Q9NQT6 498 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 MARCH2Q9P0N8 246 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 CKAP5Q14008 2032 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 ATXN2Q99700 1313 aaKnown RBP17.92■□□□□ 0.46
CPSF4-203ENST00000430038 NUMA1Q14980 2115 aa17.92■□□□□ 0.46
CPSF4-203ENST00000430038 FRYQ5TBA9 3013 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 SLC12A8A0AV02 714 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 PIK3R2O00459 728 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 XPO1O14980 1071 aaKnown RBP17.91■□□□□ 0.46
CPSF4-203ENST00000430038 KCNK5O95279 499 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 TRIM21P19474 475 aaKnown RBP17.91■□□□□ 0.46
CPSF4-203ENST00000430038 MFAP3P55082 362 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 COG7P83436 770 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 SGO2Q562F6 1265 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 KLHL10Q6JEL2 608 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 CYP2U1Q7Z449 544 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 ARHGEF19Q8IW93 802 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 CHPFQ8IZ52 775 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 TTC39CQ8N584 583 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 EDEM1Q92611 657 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 PIWIL1Q96J94 861 aaKnown RBP17.91■□□□□ 0.46
CPSF4-203ENST00000430038 SFMBT1Q9UHJ3 866 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 PCDH15Q96QU1 1955 aa17.91■□□□□ 0.46
CPSF4-203ENST00000430038 IGHV1OR15-9A0A0B4J2B8 117 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 GFRA2O00451 464 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 BIN1O00499 593 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 MAP3K13O43283 966 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 CD19P15391 556 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 GOLGA8FQ08AF8 430 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 GOLGA8DPQ0D2H9 430 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 ADIGQ0VDE8 80 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 MORC3Q14149 939 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 TRIP4Q15650 581 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-203ENST00000430038 PMF1Q6P1K2 205 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 LPCAT2Q7L5N7 544 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 C11orf74Q86VG3 221 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 SLC41A1Q8IVJ1 513 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 FAM217AQ8IXS0 508 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 ELOA2Q8IYF1 753 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-203ENST00000430038 CLEC4CQ8WTT0 213 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 DHTKD1Q96HY7 919 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-203ENST00000430038 MED15Q96RN5 788 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 FAM124BQ9H5Z6 455 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-203ENST00000430038 PILRBQ9UKJ0 227 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 SLC27A6Q9Y2P4 619 aa17.9■□□□□ 0.46
CPSF4-203ENST00000430038 SPEGQ15772 3267 aa17.89■□□□□ 0.45
CPSF4-203ENST00000430038 KHNYNO15037 678 aaKnown RBP17.89■□□□□ 0.45
CPSF4-203ENST00000430038 PMM2O15305 246 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms