RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ORC6Q9Y5N6 252 aa13.36□□□□□ -0.27
PTCH1-207ENST00000429896 MRFAP1Q9Y605 127 aa13.36□□□□□ -0.27
PTCH1-207ENST00000429896 CALCAP01258 141 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 ACADMP11310 421 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 TUBP50607 506 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 RHOAP61586 193 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 PRSS55Q6UWB4 352 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 FAM183BPQ6ZVS7 135 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 FRMD8P1Q9BZ68 369 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 GANQ9H2C0 597 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 FAM124BQ9H5Z6 455 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 SCUBE2Q9NQ36 999 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 CNTN3Q9P232 1028 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 PAK5Q9P286 719 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 ENPP3O14638 875 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 CTIFO43310 598 aaKnown RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 ACSL3O95573 720 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 SP100P23497 879 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 GET4Q7L5D6 327 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 PAPPA2Q9BXP8 1791 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 UBXN6Q9BZV1 441 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 IGKV6D-21A0A0A0MT36 114 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 CILPO75339 1184 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 WARSP23381 471 aaKnown RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 IL9RQ01113 521 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 KCNMA1Q12791 1236 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 ART3Q13508 389 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 MAP3K21Q5TCX8 1036 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 C4orf22Q6V702 233 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 FRA10AC1Q70Z53 315 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 ATAD1Q8NBU5 361 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 CCDC138Q96M89 665 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 TNS1Q9HBL0 1735 aaKnown RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 EIF4E1BA6NMX2 242 aaKnown RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 FAM155AB1AL88 458 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 MT-ND3P03897 115 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 ADSSP30520 456 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 SLC25A41Q8N5S1 370 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 PPP1R36Q96LQ0 422 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 GOLPH3Q9H4A6 298 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 AVENQ9NQS1 362 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 E5RI56 91 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 CST3P01034 146 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 CAPRIN1Q14444 709 aaKnown RBP13.35□□□□□ -0.27
PTCH1-207ENST00000429896 RASIP1Q5U651 963 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 KLC3Q6P597 504 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 TPGS1Q6ZTW0 290 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 WNT8BQ93098 351 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 TKTL2Q9H0I9 626 aa13.35□□□□□ -0.27
PTCH1-207ENST00000429896 NCLNQ969V3 563 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 TGS1Q96RS0 853 aaKnown RBP13.34□□□□□ -0.27
PTCH1-207ENST00000429896 RAD9AQ99638 391 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 IQANK1A0A1B0GTG1 560 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 PDIA2Q13087 525 aaKnown RBP13.34□□□□□ -0.27
PTCH1-207ENST00000429896 IPMKQ8NFU5 416 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 ABTB1Q969K4 478 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-207ENST00000429896 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 TFR2Q9UP52 801 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 RBP3P10745 1247 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 OR1E1P30953 314 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 PLA2G4AP47712 749 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 BLVRAP53004 296 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 VCPP55072 806 aaKnown RBP13.34□□□□□ -0.27
PTCH1-207ENST00000429896 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 NFU1Q9UMS0 254 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 DDX3XO00571 662 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTCH1-207ENST00000429896 ANXA9O76027 345 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 OCRLQ01968 901 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 TFDP3Q5H9I0 405 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 GPR158Q5T848 1215 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 MFN1Q8IWA4 741 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 SCG3Q8WXD2 468 aaKnown RBP13.34□□□□□ -0.27
PTCH1-207ENST00000429896 PIK3R5Q8WYR1 880 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 SNX19Q92543 992 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 KAT2BQ92831 832 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 ADAMTS10Q9H324 1103 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 RAB6BQ9NRW1 208 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 GPR32O75388 356 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 ACAP1Q15027 740 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 TAF1BQ53T94 588 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-207ENST00000429896 SPOCD1Q6ZMY3 1216 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 RNF135Q8IUD6 432 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 MS4A14Q96JA4 679 aa13.34□□□□□ -0.27
PTCH1-207ENST00000429896 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.27
PTCH1-207ENST00000429896 MAP3K13O43283 966 aa13.33□□□□□ -0.27
PTCH1-207ENST00000429896 RAMP2O60895 175 aa13.33□□□□□ -0.27
PTCH1-207ENST00000429896 TRUB2O95900 331 aaKnown RBP13.33□□□□□ -0.27
PTCH1-207ENST00000429896 C16orf59Q7L2K0 433 aa13.33□□□□□ -0.27
PTCH1-207ENST00000429896 SAMD11Q96NU1 681 aa13.33□□□□□ -0.27
PTCH1-207ENST00000429896 TSSK1BQ9BXA7 367 aa13.33□□□□□ -0.27
PTCH1-207ENST00000429896 OSGEPQ9NPF4 335 aa13.33□□□□□ -0.27
PTCH1-207ENST00000429896 SCHIP1Q9P0W5 487 aaPredicted RBP13.33□□□□□ -0.27
PTCH1-207ENST00000429896 SLC13A4Q9UKG4 626 aa13.33□□□□□ -0.27
PTCH1-207ENST00000429896 PTPN2P17706 415 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 CYP2F1P24903 491 aa13.33□□□□□ -0.28
PTCH1-207ENST00000429896 GEMP55040 296 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms