RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 CDK18Q07002 472 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 C1QBPQ07021 282 aaKnown RBP11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 VPS72Q15906 364 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 USP41Q3LFD5 358 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 CCDC92Q53HC0 331 aaPredicted RBP11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 MBLAC2Q68D91 279 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 FASTKD5Q7L8L6 764 aaKnown RBP11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 AMIGO3Q86WK7 504 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 ALDH16A1Q8IZ83 802 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 USP13Q92995 863 aaPredicted RBP11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 TEKT1Q969V4 418 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 MFSD14AQ96MC6 490 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 KCNK16Q96T55 309 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 OSBPL6Q9BZF3 934 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 WDR11Q9BZH6 1224 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 SLC17A6Q9P2U8 582 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 EBF1Q9UH73 591 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 EFR3BQ9Y2G0 817 aa11.45□□□□□ -0.58
SEMA4D-209ENST00000429836 E2F8A0AVK6 867 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 FBP2O00757 339 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 CFLARO15519 480 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 ADAM23O75077 832 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 DGKIO75912 1065 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 GSRP00390 522 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 HLA-DOAP06340 250 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 FGF3P11487 239 aaPredicted RBP11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 PTPN1P18031 435 aaKnown RBP11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 EPHA3P29320 983 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 NUDT2P50583 147 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 NDST2P52849 883 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 YWHAZP63104 245 aaKnown RBP11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 FLOT2Q14254 428 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 TAF5Q15542 800 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 TGFBIQ15582 683 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 PPM1LQ5SGD2 360 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 DNAJC14Q6Y2X3 702 aaPredicted RBP11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 ENOSF1Q7L5Y1 443 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 ZBTB46Q86UZ6 589 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 RFX6Q8HWS3 928 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 TICAM1Q8IUC6 712 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 DQX1Q8TE96 717 aaKnown RBP11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 FAF2Q96CS3 445 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 BRD8Q9H0E9 1235 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 APOBEC3GQ9HC16 384 aaKnown RBP11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 PCSK1NQ9UHG2 260 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 ARHGAP26Q9UNA1 814 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 HTR3EA5X5Y0 456 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 NOP56O00567 594 aaKnown RBP11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 E2F6O75461 281 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 IL1R1P14778 569 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 ZNF23P17027 643 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 TNNI1P19237 187 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 MMP8P22894 467 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 MS4A2Q01362 244 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 LZTR1Q8N653 840 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 AGR3Q8TD06 166 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 TMC2Q8TDI7 906 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 TBC1D22BQ9NU19 505 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 PTPRJQ12913 1337 aa11.44□□□□□ -0.58
SEMA4D-209ENST00000429836 GNPATO15228 680 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 ATP5BP06576 529 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 MAPTP10636 758 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 TSHRP16473 764 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PSMC3P17980 439 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 SERPINB5P36952 375 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 SPP2Q13103 211 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PPP2R5DQ14738 602 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 UGCGQ16739 394 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 ZNF362Q5T0B9 420 aaPredicted RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 LRRC38Q5VT99 294 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 TDRD10Q5VZ19 366 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PTAR1Q7Z6K3 402 aaPredicted RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 CROCCP3Q8IVE0 287 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 TMEM161BQ8NDZ6 487 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 BHLHE22Q8NFJ8 381 aaPredicted RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 TMEM174Q8WUU8 243 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 VCPIP1Q96JH7 1222 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PPP1R36Q96LQ0 422 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PPP1R10Q96QC0 940 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 CDRT15Q96T59 188 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 SLC2A11Q9BYW1 496 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PAIP1Q9H074 479 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 SEMA6AQ9H2E6 1030 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 POPDC2Q9HBU9 364 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 RAB6BQ9NRW1 208 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 EMCNQ9ULC0 261 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PRR12Q9ULL5 1215 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 COQ6Q9Y2Z9 468 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 CROCCQ5TZA2 2017 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 C7orf72A4D263 438 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 STX16-NPEPL1H3BU86 382 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 MAP3K6O95382 1288 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 FGFR3P22607 806 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 CRHR1P34998 444 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PTPN7P35236 360 aa11.43□□□□□ -0.58
SEMA4D-209ENST00000429836 PHKA2P46019 1235 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms