RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 FAM49BQ9NUQ9 324 aa13.79□□□□□ -0.2
SNRNP200-202ENST00000429650 KCNK4Q9NYG8 393 aa13.79□□□□□ -0.2
SNRNP200-202ENST00000429650 SIRPGQ9P1W8 387 aa13.79□□□□□ -0.2
SNRNP200-202ENST00000429650 SMNDC1O75940 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 LGALS2P05162 132 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 TFE3P19532 575 aaPredicted RBP13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 CMPK2Q5EBM0 449 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 GJC2Q5T442 439 aaPredicted RBP13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 SESTD1Q86VW0 696 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 VPS52Q8N1B4 723 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 MPP5Q8N3R9 675 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 GSDMBQ8TAX9 411 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 SLC35F5Q8WV83 523 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 E2F7Q96AV8 911 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 MTBPQ96DY7 904 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 FAM167BQ9BTA0 163 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 B3GNT5Q9BYG0 378 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 ARHGEF4Q9NR80 690 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 ARMCX1Q9P291 453 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 HMX2A2RU54 273 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 FAM159BA6NKW6 160 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 ZNF487B1APH4 448 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 CYB561D2O14569 222 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 TSPAN1O60635 241 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 GCATO75600 419 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 KRT38O76015 456 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 RARBP10826 455 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 PAX7P23759 505 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 GBE1Q04446 702 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 ARHGAP1Q07960 439 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 SLC10A2Q12908 348 aaPredicted RBP13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 TEX44Q53QW1 395 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 ATG16L1Q676U5 607 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 TRIM68Q6AZZ1 485 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 C4orf22Q6V702 233 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 NT5DC4Q86YG4 428 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 MCUR1Q96AQ8 359 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 EBNA1BP2Q99848 306 aaKnown RBP13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 NME7Q9Y5B8 376 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 MAD1L1Q9Y6D9 718 aa13.78□□□□□ -0.2
SNRNP200-202ENST00000429650 CCDC195A0A1B0GUA6 201 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 SETSIPP0DME0 302 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 TPSB2P20231 275 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 ATP6V1C1P21283 382 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 OCRLQ01968 901 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 KPNB1Q14974 876 aaKnown RBP13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 TPSAB1Q15661 275 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 CHI3L2Q15782 390 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 ACSBG2Q5FVE4 666 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 MMADHCQ9H3L0 296 aaPredicted RBP13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 PCMTD2Q9NV79 361 aa13.77□□□□□ -0.2
SNRNP200-202ENST00000429650 DESP17661 470 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 L1CAMP32004 1257 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 DPYSL2Q16555 572 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 MROH9Q5TGP6 573 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 TMCO4Q5TGY1 634 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 GET4Q7L5D6 327 aaPredicted RBP13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 ARID3BQ8IVW6 561 aaPredicted RBP13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 GPC2Q8N158 579 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 TEX9Q8N6V9 391 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 CFAP61Q8NHU2 1237 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 CXCL16Q9H2A7 254 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 ZNF395Q9H8N7 513 aaPredicted RBP13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.77□□□□□ -0.219e-7■■■■□ 19.7
SNRNP200-202ENST00000429650 STOML1Q9UBI4 398 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 SNX9Q9Y5X1 595 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 CAPN14A8MX76 684 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 PPEF2O14830 753 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 GRIA1P42261 906 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 ATXN1P54253 815 aaKnown RBP13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 RCN1Q15293 331 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 NUDCD3Q8IVD9 361 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 NDUFAF2Q8N183 169 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 MICAL1Q8TDZ2 1067 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 WDR60Q8WVS4 1066 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 CCDC97Q96F63 343 aaPredicted RBP13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 CLMNQ96JQ2 1002 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 MAGEB5Q9BZ81 275 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 TRIM6Q9C030 488 aaPredicted RBP13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 DHX35Q9H5Z1 703 aaKnown RBP13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 HESX1Q9UBX0 185 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 PCDHA11Q9Y5I1 949 aa13.77□□□□□ -0.21
SNRNP200-202ENST00000429650 ADM5C9JUS6 153 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 KRT36O76013 467 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 CRHR1P34998 444 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 PTPN9P43378 593 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 KCNT2Q6UVM3 1135 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 CCDC33Q8N5R6 958 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 DNAJC9Q8WXX5 260 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 QKIQ96PU8 341 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 C11orf84Q9BUA3 381 aaPredicted RBP13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 MTMR10Q9NXD2 777 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 A6NJR5 290 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 CXCL11O14625 94 aa13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 SKAP2O75563 359 aaPredicted RBP13.76□□□□□ -0.21
SNRNP200-202ENST00000429650 BPGMP07738 259 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms