RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 F9P00740 461 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 IGLV3-25P01717 112 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 RHOP08100 348 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 MYL4P12829 197 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 HECTD3Q5T447 861 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 MEI1Q5TIA1 1274 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 ANKRD54Q6NXT1 300 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 KLHDC10Q6PID8 442 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 TMC5Q6UXY8 1006 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 PDZD4Q76G19 769 aaPredicted RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 ADAM32Q8TC27 787 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 SMG7Q92540 1137 aaKnown RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 CD101Q93033 1021 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 NECAB3Q96P71 396 aaPredicted RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 GCNAQ96QF7 691 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 PIDD1Q9HB75 910 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 BRWD1Q9NSI6 2320 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 OAS1P00973 400 aaKnown RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 GBP1P32455 592 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 RDXP35241 583 aaKnown RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 ATP5C1P36542 298 aaKnown RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 DEUP1Q05D60 604 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 EIF4EBP2Q13542 120 aaPredicted RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 CTC1Q2NKJ3 1217 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 RAB6CQ53S08 254 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 C10orf120Q5SQS8 335 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 SYT10Q6XYQ8 523 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 GRASPQ7Z6J2 395 aaPredicted RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 TAC4Q86UU9 113 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 MRPS31Q92665 395 aaKnown RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 SERPINB11Q96P15 392 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 RAB6CQ9H0N0 254 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 ATXN3LQ9H3M9 355 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 UBE2ZQ9H832 354 aaPredicted RBP17.78■□□□□ 0.44
LINC00887-203ENST00000429578 FAM204AQ9H8W3 233 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 DDIT4Q9NX09 232 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 SFMBT1Q9UHJ3 866 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 DNAI1Q9UI46 699 aa17.78■□□□□ 0.44
LINC00887-203ENST00000429578 TCF20Q9UGU0 1960 aaKnown RBP17.77■□□□□ 0.44
LINC00887-203ENST00000429578 A0A1W2PRU2 124 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 TBX18O95935 607 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 TNNT1P13805 278 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 HOXB8P17481 243 aaPredicted RBP17.77■□□□□ 0.44
LINC00887-203ENST00000429578 MIPP30301 263 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 CCR2P41597 374 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 NME3Q13232 169 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 SYCE2Q6PIF2 218 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 HES6Q96HZ4 224 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 PIGVQ9NUD9 493 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 TMEM51Q9NW97 253 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 USP18Q9UMW8 372 aa17.77■□□□□ 0.44
LINC00887-203ENST00000429578 PACSIN2Q9UNF0 486 aaPredicted RBP17.77■□□□□ 0.44
LINC00887-203ENST00000429578 DENND4AQ7Z401 1863 aa17.77■□□□□ 0.43
LINC00887-203ENST00000429578 CCDC66A2RUB6 948 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 C2orf78A6NCI8 922 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 MIF4GDA9UHW6 222 aaKnown RBP17.76■□□□□ 0.43
LINC00887-203ENST00000429578 ENC1O14682 589 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 FANCGO15287 622 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 IRAK2O43187 625 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 COCHO43405 550 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 TCF4P15884 667 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 SSR1P43307 286 aaKnown RBP17.76■□□□□ 0.43
LINC00887-203ENST00000429578 ATXN1P54253 815 aaKnown RBP17.76■□□□□ 0.43
LINC00887-203ENST00000429578 TAS2R40P59535 323 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 SLC25A11Q02978 314 aaKnown RBP17.76■□□□□ 0.43
LINC00887-203ENST00000429578 EFEMP1Q12805 493 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 COL19A1Q14993 1142 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 HADHQ16836 314 aaKnown RBP17.76■□□□□ 0.43
LINC00887-203ENST00000429578 PRSS36Q5K4E3 855 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 RARS2Q5T160 578 aaKnown RBP17.76■□□□□ 0.43
LINC00887-203ENST00000429578 GPR149Q86SP6 731 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 RHOT1Q8IXI2 618 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 TLR10Q9BXR5 811 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 NACA2Q9H009 215 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 WDR6Q9NNW5 1121 aaKnown RBP17.76■□□□□ 0.43
LINC00887-203ENST00000429578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.76■□□□□ 0.43
LINC00887-203ENST00000429578 MARCH2Q9P0N8 246 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 DNMT3LQ9UJW3 386 aa17.76■□□□□ 0.43
LINC00887-203ENST00000429578 SYNJ2BP-COX16A0A087WUM0 186 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 CTAGE9A4FU28 777 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 ZNF197O14709 1029 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 PSTPIP1O43586 416 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 OLFM2O95897 454 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 PFKLP17858 780 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 CASQ1P31415 396 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 CTNNA1P35221 906 aaKnown RBP17.75■□□□□ 0.43
LINC00887-203ENST00000429578 CYP4F8P98187 520 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 NNTQ13423 1086 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 SLC5A9Q2M3M2 681 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 LRRC38Q5VT99 294 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 TXNDC8Q6A555 127 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 SCYL2Q6P3W7 929 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 SND1Q7KZF4 910 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC00887-203ENST00000429578 POLNQ7Z5Q5 900 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 SHKBP1Q8TBC3 707 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 NAPGQ99747 312 aaPredicted RBP17.75■□□□□ 0.43
LINC00887-203ENST00000429578 RNF38Q9H0F5 515 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 CLDND1Q9NY35 253 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 COX16Q9P0S2 106 aa17.75■□□□□ 0.43
LINC00887-203ENST00000429578 CLEC1BQ9P126 229 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms