RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SKIV2L2P42285 1042 aaKnown RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 SARNPP82979 210 aaKnown RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 SOX4Q06945 474 aaPredicted RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 BNIP1Q12981 228 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 MTM1Q13496 603 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 KBTBD12Q3ZCT8 623 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 FYB2Q5VWT5 728 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 SLC26A11Q86WA9 606 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 PARP9Q8IXQ6 854 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 SMG8Q8ND04 991 aaKnown RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 PPP1R13LQ8WUF5 828 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 SOCS4Q8WXH5 440 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 KCTD13Q8WZ19 329 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 CFAP36Q96G28 342 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 APOPT1Q96IL0 206 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 APBA2Q99767 749 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 RNF39Q9H2S5 420 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 ECT2Q9H8V3 914 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 ETNK1Q9HBU6 452 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 POPDC2Q9HBU9 364 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 XAB2Q9HCS7 855 aaKnown RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 WBP1LQ9NX94 342 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 ZNF180Q9UJW8 692 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 SF3B1O75533 1304 aaKnown RBP eCLIP14.18□□□□□ -0.14
THBS3-202ENST00000428962 H3BRJ5 948 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 KPNA6O60684 536 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 LPXNO60711 386 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 DCTN3O75935 186 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 GBE1Q04446 702 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 ADIGQ0VDE8 80 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 TAF1CQ15572 869 aaPredicted RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 SNCBQ16143 134 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 FSCN1Q16658 493 aaKnown RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 ZNF618Q5T7W0 954 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 TTC39BQ5VTQ0 682 aaPredicted RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 NCBP2-AS2Q69YL0 99 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 RGMBQ6NW40 437 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 PIGZQ86VD9 579 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 CCDC185Q8N715 623 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 CCDC110Q8TBZ0 833 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 TFB1MQ8WVM0 346 aaKnown RBP14.18□□□□□ -0.14
THBS3-202ENST00000428962 FAM149B1Q96BN6 582 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 VPS11Q9H270 941 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 GOLGA2P5Q9HBQ8 144 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 LRRC4Q9HBW1 653 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 RNF19AQ9NV58 838 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 MTMR10Q9NXD2 777 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 GRID1Q9ULK0 1009 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 FZD10Q9ULW2 581 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 TTLL3Q9Y4R7 772 aa14.18□□□□□ -0.14
THBS3-202ENST00000428962 MANSC4A6NHS7 340 aaPredicted RBP14.17□□□□□ -0.14
THBS3-202ENST00000428962 CYB561D2O14569 222 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 KRT37O76014 449 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 FBXO21O94952 628 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 TROVE2P10155 538 aaKnown RBP eCLIP14.17□□□□□ -0.14
THBS3-202ENST00000428962 PTPN1P18031 435 aaKnown RBP14.17□□□□□ -0.14
THBS3-202ENST00000428962 PRKCHP24723 683 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 NOS2P35228 1153 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 FDFT1P37268 417 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 NCALDP61601 193 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 MRPS5P82675 430 aaKnown RBP14.17□□□□□ -0.14
THBS3-202ENST00000428962 BEX3Q00994 111 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 FAXCQ5TGI0 409 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 KCNT2Q6UVM3 1135 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 CAND1Q86VP6 1230 aaKnown RBP14.17□□□□□ -0.14
THBS3-202ENST00000428962 OSTM1Q86WC4 334 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 LRRC6Q86X45 466 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 ECHDC2Q86YB7 292 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 DEFB106AQ8N104 65 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 SIX6OS1Q8N1H7 587 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 ZNF398Q8TD17 642 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 TCP10LQ8TDR4 215 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 ZNF75CPQ92670 426 aaPredicted RBP14.17□□□□□ -0.14
THBS3-202ENST00000428962 RMDN2Q96LZ7 410 aa14.17□□□□□ -0.14
THBS3-202ENST00000428962 PPP1R10Q96QC0 940 aaKnown RBP14.17□□□□□ -0.14
THBS3-202ENST00000428962 AOC2O75106 756 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 AVILO75366 819 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 ATP5HO75947 161 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 FAM155BO75949 473 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 MAP3K6O95382 1288 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 APOEP02649 317 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 FAM200BP0CF97 657 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 ADRA1DP25100 572 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 MAGEA3P43357 314 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 MNAT1P51948 309 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 ATXN1P54253 815 aaKnown RBP14.16□□□□□ -0.14
THBS3-202ENST00000428962 CDK16Q00536 496 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 PURAQ00577 322 aaKnown RBP14.16□□□□□ -0.14
THBS3-202ENST00000428962 SLC18A2Q05940 514 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 NOGQ13253 232 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 SEMA5AQ13591 1074 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 SYCP2LQ5T4T6 812 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 RSPH3Q86UC2 560 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 FAM228AQ86W67 206 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 CHSY1Q86X52 802 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 CTAGE3PQ8IX95 158 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 TMEM86AQ8N2M4 240 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 FITM2Q8N6M3 262 aa14.16□□□□□ -0.14
THBS3-202ENST00000428962 ARRDC4Q8NCT1 418 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms