RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 CDH8P55286 799 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 CBX3Q13185 183 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 DHX34Q14147 1143 aaKnown RBP11.87□□□□□ -0.51
CECR3-201ENST00000428828 SNX30Q5VWJ9 437 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 DCLRE1AQ6PJP8 1040 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 KCNT2Q6UVM3 1135 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 SLFN11Q7Z7L1 901 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 LRRC57Q8N9N7 239 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 BCL7CQ8WUZ0 217 aaPredicted RBP11.87□□□□□ -0.51
CECR3-201ENST00000428828 MAGEB18Q96M61 343 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 KREMEN1Q96MU8 473 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 RUNDC3BQ96NL0 473 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 TMEM175Q9BSA9 504 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 TMEM165Q9HC07 324 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 TRPV5Q9NQA5 729 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 MARCH5Q9NX47 278 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 CEP72Q9P209 647 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 ADAM28Q9UKQ2 775 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 MTUS1Q9ULD2 1270 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 TRIM33Q9UPN9 1127 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 ZNF148Q9UQR1 794 aa11.87□□□□□ -0.51
CECR3-201ENST00000428828 TIMM13Q9Y5L4 95 aaPredicted RBP11.87□□□□□ -0.51
CECR3-201ENST00000428828 EIF4E1BA6NMX2 242 aaKnown RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 CYB561D2O14569 222 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 ITGA2BP08514 1039 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 P4HA1P13674 534 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 LAG3P18627 525 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 MFAP3P55082 362 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 IFI35P80217 286 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 SLC34A1Q06495 639 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 TIGD5Q53EQ6 642 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 CCDC92Q53HC0 331 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 CD300LGQ6UXG3 332 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 SPRED2Q7Z698 418 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 ZNF554Q86TJ5 538 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 CCNJLQ8IV13 435 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 COLGALT1Q8NBJ5 622 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 SCG3Q8WXD2 468 aaKnown RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 B3GALT6Q96L58 329 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 SENP8Q96LD8 212 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 ZNF558Q96NG5 402 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 ERP44Q9BS26 406 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 COLEC11Q9BWP8 271 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 TBC1D10AQ9BXI6 508 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 SDCBP2Q9H190 292 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 PRDM16Q9HAZ2 1276 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 SAR1AQ9NR31 198 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 BARX2Q9UMQ3 279 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 STARD13Q9Y3M8 1113 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 CHD9Q3L8U1 2897 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 ATG2AQ2TAZ0 1938 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 A0A0A6YYK5 440 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 HUS1O60921 280 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 CSPG5O95196 566 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 STAU1O95793 577 aaKnown RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 CA3P07451 260 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 LYNP07948 512 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 KRT5P13647 590 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 TBXAS1P24557 533 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 PBX2P40425 430 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 SERPINB8P50452 374 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 CLCN2P51788 898 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 ARID5AQ03989 594 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 ORC1Q13415 861 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 AUHQ13825 339 aaKnown RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 DRAP1Q14919 205 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 ADRM1Q16186 407 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 ZNF394Q53GI3 561 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 APPL2Q8NEU8 664 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 SLC7A6OSQ96CW6 309 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 SERPINB12Q96P63 405 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 MRPL45Q9BRJ2 306 aaKnown RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 TUBB6Q9BUF5 446 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 DENND2DQ9H6A0 471 aaPredicted RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 VRTNQ9H8Y1 702 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 LRRC4CQ9HCJ2 640 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 SPATA7Q9P0W8 599 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 STX18Q9P2W9 335 aaKnown RBP11.86□□□□□ -0.51
CECR3-201ENST00000428828 AMACRQ9UHK6 382 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 INTUQ9ULD6 942 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 USH1CQ9Y6N9 552 aa11.86□□□□□ -0.51
CECR3-201ENST00000428828 RASGRF2O14827 1237 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 TTI1O43156 1089 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 HCRTO43612 131 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 ARHGEF15O94989 841 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 ODC1P11926 461 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 RFX1P22670 979 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 PTPN4P29074 926 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 CD97P48960 835 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 GCNT1Q02742 428 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 MGAT5Q09328 741 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 SOWAHAQ2M3V2 549 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 FUT10Q6P4F1 479 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 C4orf50Q6ZRC1 276 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 RINLQ6ZS11 566 aa11.85□□□□□ -0.51
CECR3-201ENST00000428828 MARK2Q7KZI7 788 aaKnown RBP11.85□□□□□ -0.51
CECR3-201ENST00000428828 ADGRF2Q8IZF7 708 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms