RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZSWIM1Q9BR11 485 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 KIAA1468Q9P260 1216 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 WDR35Q9P2L0 1181 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 HCN2Q9UL51 889 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 STRIP2Q9ULQ0 834 aa19.29■□□□□ 0.68
PSPC1-202ENST00000427943 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.29■□□□□ 0.68
PSPC1-202ENST00000427943 TCRBV21S2A2A0A5A6 115 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 MED19A0JLT2 244 aaPredicted RBP19.28■□□□□ 0.68
PSPC1-202ENST00000427943 M0QYV0 167 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 PIK3R2O00459 728 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 ALDH1A2O94788 518 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 GNA14O95837 355 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 AFPP02771 609 aaKnown RBP19.28■□□□□ 0.68
PSPC1-202ENST00000427943 PAEPP09466 180 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 LCP1P13796 627 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 BCKDHBP21953 392 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 MARSP56192 900 aaKnown RBP19.28■□□□□ 0.68
PSPC1-202ENST00000427943 FOXK2Q01167 660 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 PKDCCQ504Y2 493 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 USP39Q53GS9 565 aaKnown RBP19.28■□□□□ 0.68
PSPC1-202ENST00000427943 NUDT18Q6ZVK8 323 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 SIX6OS1Q8N1H7 587 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 EHBP1Q8NDI1 1231 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 HMGB4Q8WW32 186 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 EDEM1Q92611 657 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 INTS2Q9H0H0 1204 aaKnown RBP19.28■□□□□ 0.68
PSPC1-202ENST00000427943 POLMQ9NP87 494 aaPredicted RBP19.28■□□□□ 0.68
PSPC1-202ENST00000427943 BCCIPQ9P287 314 aaKnown RBP eCLIP19.28■□□□□ 0.68
PSPC1-202ENST00000427943 KIAA1257Q9ULG3 409 aa19.28■□□□□ 0.68
PSPC1-202ENST00000427943 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.28■□□□□ 0.68
PSPC1-202ENST00000427943 YJEFN3A6XGL0 299 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 PRRT4C9JH25 899 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 E7ENQ6 273 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 SDHBP21912 280 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 MPLP40238 635 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 DGKGP49619 791 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 AASDHQ4L235 1098 aaPredicted RBP19.27■□□□□ 0.68
PSPC1-202ENST00000427943 LCLAT1Q6UWP7 414 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 DENND1CQ8IV53 801 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 RLN3Q8WXF3 142 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 ERLEC1Q96DZ1 483 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 KREMEN1Q96MU8 473 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 ACOX2Q99424 681 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 DCLK3Q9C098 648 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 AGO1Q9UL18 857 aaKnown RBP19.27■□□□□ 0.68
PSPC1-202ENST00000427943 ZNF510Q9Y2H8 683 aa19.27■□□□□ 0.68
PSPC1-202ENST00000427943 GABBR2O75899 941 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 RHOBTB1O94844 696 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 HOXB2P14652 356 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 DAOAP59103 153 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 GCNT1Q02742 428 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 CREB5Q02930 508 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 BSPRYQ5W0U4 402 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 PMS2CLQ68D20 193 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 PMF1Q6P1K2 205 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 TRMT11Q7Z4G4 463 aaKnown RBP19.26■□□□□ 0.67
PSPC1-202ENST00000427943 CREBRFQ8IUR6 639 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 PGBD3Q8N328 593 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 C12orf50Q8NA57 414 aaPredicted RBP19.26■□□□□ 0.67
PSPC1-202ENST00000427943 NETO1Q8TDF5 533 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 RNF139Q8WU17 664 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 KCTD13Q8WZ19 329 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 OLA1Q9NTK5 396 aaKnown RBP19.26■□□□□ 0.67
PSPC1-202ENST00000427943 SFMBT1Q9UHJ3 866 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 RWDD2AQ9UIY3 292 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 PCDHGA5Q9Y5G8 931 aa19.26■□□□□ 0.67
PSPC1-202ENST00000427943 LAMA1P25391 3075 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 DCDC2BA2VCK2 349 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 FGFR1OPO95684 399 aaKnown RBP19.25■□□□□ 0.67
PSPC1-202ENST00000427943 CISD3P0C7P0 127 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 ZNF806P0C7X5 589 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 NTSR1P30989 418 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 CHKAP35790 457 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 ZNF132P52740 706 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 CNGA2Q16280 664 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 PLA2G2CQ5R387 149 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 FYB2Q5VWT5 728 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 FMNL3Q8IVF7 1028 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 CHPFQ8IZ52 775 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 FRMD1Q8N878 549 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 OLIG1Q8TAK6 271 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 CLEC4CQ8WTT0 213 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 PLD4Q96BZ4 506 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 MED15Q96RN5 788 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 RTKNQ9BST9 563 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 CNGB3Q9NQW8 809 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 RXFP3Q9NSD7 469 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 STARD13Q9Y3M8 1113 aa19.25■□□□□ 0.67
PSPC1-202ENST00000427943 MSI1O43347 362 aaKnown RBP19.24■□□□□ 0.67
PSPC1-202ENST00000427943 PENKP01210 267 aaPredicted RBP19.24■□□□□ 0.67
PSPC1-202ENST00000427943 KRT5P13647 590 aa19.24■□□□□ 0.67
PSPC1-202ENST00000427943 P2RY2P41231 377 aa19.24■□□□□ 0.67
PSPC1-202ENST00000427943 TCEAL6Q6IPX3 200 aa19.24■□□□□ 0.67
PSPC1-202ENST00000427943 KCNV2Q8TDN2 545 aa19.24■□□□□ 0.67
PSPC1-202ENST00000427943 SLC35F5Q8WV83 523 aa19.24■□□□□ 0.67
PSPC1-202ENST00000427943 TCEAL3Q969E4 200 aa19.24■□□□□ 0.67
PSPC1-202ENST00000427943 CRACR2AQ9BSW2 395 aa19.24■□□□□ 0.67
PSPC1-202ENST00000427943 CKAP5Q14008 2032 aa19.24■□□□□ 0.67
PSPC1-202ENST00000427943 SLC30A4O14863 429 aa19.23■□□□□ 0.67
PSPC1-202ENST00000427943 FOXD2O60548 495 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms