RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 GANQ9H2C0 597 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 DCTN4Q9UJW0 460 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 MRPS17Q9Y2R5 130 aaKnown RBP11.01□□□□□ -0.65
TCOF1-204ENST00000427724 MYADML2A6NDP7 307 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 P4HA2O15460 535 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 MT-ND3P03897 115 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 KLC1Q07866 573 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 TMED1Q13445 227 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 SLC35G1Q2M3R5 365 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 RFX8Q6ZV50 586 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 CENPUQ71F23 418 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 TMCO2Q7Z6W1 182 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-204ENST00000427724 SLC13A5Q86YT5 568 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-204ENST00000427724 EMC1Q8N766 993 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 POF1BQ8WVV4 589 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 HDAC11Q96DB2 347 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 ZSWIM1Q9BR11 485 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 CINPQ9BW66 212 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-204ENST00000427724 PRDM12Q9H4Q4 367 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 BFARQ9NZS9 450 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 SLC30A1Q9Y6M5 507 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 CNTRLQ7Z7A1 2325 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 PFKMP08237 780 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 COILP38432 576 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-204ENST00000427724 OXCT1P55809 520 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 RHOAP61586 193 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 SGCGQ13326 291 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 CUL3Q13618 768 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 RCN2Q14257 317 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 SPARCL1Q14515 664 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.01□□□□□ -0.65
TCOF1-204ENST00000427724 RETSATQ6NUM9 610 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 ADCK2Q7Z695 626 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 IQCKQ8N0W5 287 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 TTC13Q8NBP0 860 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 CFAP36Q96G28 342 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 BBS2Q9BXC9 721 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 ULBP1Q9BZM6 244 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 IL23AQ9NPF7 189 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 TLK1Q9UKI8 766 aa11.01□□□□□ -0.65
TCOF1-204ENST00000427724 A0A0G2JND7 137 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 APOL1O14791 398 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 CA3P07451 260 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 GRM5P41594 1212 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 TAP1Q03518 808 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 SH2D4BQ5SQS7 431 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 SPATA21Q7Z572 469 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 SCUBE3Q8IX30 993 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 HS6ST3Q8IZP7 471 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 CCDC33Q8N5R6 958 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 PAPOLBQ9NRJ5 636 aaKnown RBP11□□□□□ -0.65
TCOF1-204ENST00000427724 MCM8Q9UJA3 840 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 CRYBG1Q9Y4K1 1723 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 NOL4O94818 638 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 HSPA8P11142 646 aaKnown RBP11□□□□□ -0.65
TCOF1-204ENST00000427724 NSUN2Q08J23 767 aaKnown RBP eCLIP11□□□□□ -0.65
TCOF1-204ENST00000427724 POM121L1PQ3SYA9 428 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 CBWD6Q4V339 395 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 CBWD3Q5JTY5 395 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 CBWD5Q5RIA9 395 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 SDCCAG8Q86SQ7 713 aaPredicted RBP11□□□□□ -0.65
TCOF1-204ENST00000427724 MFN1Q8IWA4 741 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 LGI2Q8N0V4 545 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 AFAP1L2Q8N4X5 818 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 SLC25A41Q8N5S1 370 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 DTX3LQ8TDB6 740 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 AASDHPPTQ9NRN7 309 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 TAS2R14Q9NYV8 317 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 HACD3Q9P035 362 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 STOML1Q9UBI4 398 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 USP15Q9Y4E8 981 aaPredicted RBP11□□□□□ -0.65
TCOF1-204ENST00000427724 MYH8P13535 1937 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 ARL5CA6NH57 179 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 FBXO21O94952 628 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 EOMESO95936 686 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 GARSP41250 739 aaKnown RBP11□□□□□ -0.65
TCOF1-204ENST00000427724 CLCNKBP51801 687 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 IFI35P80217 286 aaPredicted RBP11□□□□□ -0.65
TCOF1-204ENST00000427724 FAM124AQ86V42 546 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 ECHDC2Q86YB7 292 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 ZBED8Q8IZ13 594 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 MORC4Q8TE76 937 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 LRRC15Q8TF66 581 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 OMDQ99983 421 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 SMYD3Q9H7B4 428 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 CACYBPQ9HB71 228 aaKnown RBP11□□□□□ -0.65
TCOF1-204ENST00000427724 C15orf41Q9Y2V0 281 aa11□□□□□ -0.65
TCOF1-204ENST00000427724 OR6C75A6NL08 312 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 POLR2EP19388 210 aaKnown RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 CCR1P32246 355 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 ITGA8P53708 1063 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 IRF2BP2Q7Z5L9 587 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 ATL2Q8NHH9 583 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 LRRC37BQ96QE4 947 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 UVRAGQ9P2Y5 699 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 CHD4Q14839 1912 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 H3BQ06 376 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 TRDMT1O14717 391 aaKnown RBP10.99□□□□□ -0.65
TCOF1-204ENST00000427724 UBOX5O94941 541 aa10.99□□□□□ -0.65
TCOF1-204ENST00000427724 SPATA31C1P0DKV0 1188 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms