RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CYP51A1Q16850 503 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 FAXCQ5TGI0 409 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 ANO5Q75V66 913 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 TLK2Q86UE8 772 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 CACUL1Q86Y37 369 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 GRAMD1CQ8IYS0 662 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 GPC2Q8N158 579 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 SHDQ96IW2 340 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 STRBPQ96SI9 672 aaKnown RBP5.9□□□□□ -1.47
HERC4-206ENST00000427635 FTHL17Q9BXU8 183 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 PAK5Q9P286 719 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 GULP1Q9UBP9 304 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 MRTO4Q9UKD2 239 aaKnown RBP5.9□□□□□ -1.47
HERC4-206ENST00000427635 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.9□□□□□ -1.47
HERC4-206ENST00000427635 CPSF4O95639 269 aaKnown RBP5.9□□□□□ -1.47
HERC4-206ENST00000427635 COX7A2P14406 83 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 SCNN1AP37088 669 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 CASRP41180 1078 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 RPL21P46778 160 aaKnown RBP5.9□□□□□ -1.47
HERC4-206ENST00000427635 CDH8P55286 799 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 COPZ1P61923 177 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 MOGSQ13724 837 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 CYP2A13Q16696 494 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 FAM83EQ2M2I3 478 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 RARS2Q5T160 578 aaKnown RBP5.9□□□□□ -1.47
HERC4-206ENST00000427635 METTL21AQ8WXB1 218 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 CMTM5Q96DZ9 223 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 SLC4A9Q96Q91 983 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 TCF25Q9BQ70 676 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 CORO1BQ9BR76 489 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 FAM167BQ9BTA0 163 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 BRINP2Q9C0B6 783 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 GOLPH3Q9H4A6 298 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 AVENQ9NQS1 362 aaPredicted RBP5.9□□□□□ -1.47
HERC4-206ENST00000427635 ANKEF1Q9NU02 776 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 SPTLC3Q9NUV7 552 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 NCDNQ9UBB6 729 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 GNEQ9Y223 722 aaKnown RBP5.9□□□□□ -1.47
HERC4-206ENST00000427635 CLASP1Q7Z460 1538 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 NDUFB10O96000 172 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 FGBP02675 491 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 STAT4Q14765 748 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 PKN2Q16513 984 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 AMHR2Q16671 573 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 MDH1BQ5I0G3 518 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 PEG10Q86TG7 708 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 DEPDC4Q8N2C3 294 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 NEDD1Q8NHV4 660 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 BCAS4Q8TDM0 211 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 SYTL5Q8TDW5 730 aaPredicted RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 TGIF2Q9GZN2 237 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ZDHHC6Q9H6R6 413 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 DIABLOQ9NR28 239 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 IMPAD1Q9NX62 359 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ZIM2Q9NZV7 527 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 BLOC1S6Q9UL45 172 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 PTPRMP28827 1452 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 RNF103O00237 685 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 CYP26A1O43174 497 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 IGFALSP35858 605 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 CLCN6P51797 869 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 SEC13P55735 322 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 TSC22D1Q15714 1073 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GLRA4Q5JXX5 417 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ATAT1Q5SQI0 421 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GPR158Q5T848 1215 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 PPP2R2DQ66LE6 453 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ZBTB46Q86UZ6 589 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GATAD2AQ86YP4 633 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 LINC00116Q8NCU8 138 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ABTB1Q969K4 478 aaPredicted RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 RACGAP1Q9H0H5 632 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 VTA1Q9NP79 307 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 HCN3Q9P1Z3 774 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ZNHIT2Q9UHR6 403 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 NR2E1Q9Y466 385 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 NEDD4P46934 1319 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ZMYM2Q9UBW7 1377 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GRAP2O75791 330 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 DDNO94850 711 aaPredicted RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 APRTP07741 180 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ZNF286BP0CG31 522 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 PABPC1P11940 636 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 PTGER2P43116 358 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ARFIP2P53365 341 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 RCAN1P53805 252 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GABPB1Q06547 395 aaPredicted RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 GRIK4Q16099 956 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 SBK1Q52WX2 424 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 RBM20Q5T481 1227 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 OVOS1Q6IE37 1185 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 OTOAQ7RTW8 1153 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 R3HCC1LQ7Z5L2 792 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 RBM23Q86U06 439 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 PRPF39Q86UA1 669 aaKnown RBP5.89□□□□□ -1.47
HERC4-206ENST00000427635 NPAS4Q8IUM7 802 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 GALNT6Q8NCL4 622 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 QRFPRQ96P65 431 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 BTBD9Q96Q07 612 aa5.89□□□□□ -1.47
HERC4-206ENST00000427635 ECSITQ9BQ95 431 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms