RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 CYP1A1P04798 512 aaPredicted RBP16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 FYNP06241 537 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 SKILP12757 684 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 FERP16591 822 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 CASP14P31944 242 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 ACADSBP45954 432 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 RPS9P46781 194 aaKnown RBP16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 GSDMDP57764 484 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 GOLGA8FQ08AF8 430 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 GOLGA8DPQ0D2H9 430 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 SFMBT2Q5VUG0 894 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 NAA35Q5VZE5 725 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 BTBD8Q5XKL5 378 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 FAM183BPQ6ZVS7 135 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 ZNF677Q86XU0 584 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 MIB1Q86YT6 1006 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 VSTM4Q8IW00 320 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 TMEM35BQ8NCS4 154 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 SLC30A5Q8TAD4 765 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 CHFRQ96EP1 664 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 ZNF830Q96NB3 372 aaPredicted RBP16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 SYT11Q9BT88 431 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 NUP58Q9BVL2 599 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 KLF16Q9BXK1 252 aaPredicted RBP16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 EDEM3Q9BZQ6 932 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 KCNF1Q9H3M0 494 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 AIPL1Q9NZN9 384 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 CAPN11Q9UMQ6 739 aa16.41■□□□□ 0.22
CLK3P2-201ENST00000427566 KIAA1549LQ6ZVL6 1849 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 E2F8A0AVK6 867 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 FBXO21O94952 628 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 LTFP02788 710 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 HMBSP08397 361 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 GALK1P51570 392 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 CSTF1Q05048 431 aaKnown RBP16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 EFEMP1Q12805 493 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 GRSF1Q12849 480 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 MTAPQ13126 283 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 DGKKQ5KSL6 1271 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 NAIF1Q69YI7 327 aaPredicted RBP16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 TADA2BQ86TJ2 420 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 ZNF687Q8N1G0 1237 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 ARHGAP18Q8N392 663 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 EXOC4Q96A65 974 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 AGPAT1Q99943 283 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 P2RY13Q9BPV8 354 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 CHRDQ9H2X0 955 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 HAUS4Q9H6D7 363 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 TBC1D14Q9P2M4 693 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 DNMT3LQ9UJW3 386 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 LSM7Q9UK45 103 aaKnown RBP16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 CEP83Q9Y592 693 aa16.4■□□□□ 0.22
CLK3P2-201ENST00000427566 ITIH6Q6UXX5 1313 aa16.39■□□□□ 0.22
CLK3P2-201ENST00000427566 GRAP2O75791 330 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 CYP17A1P05093 508 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 UNGP13051 313 aaPredicted RBP16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 ASIC2Q16515 512 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 SYPL2Q5VXT5 272 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 SPECC1LQ69YQ0 1117 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 OR6B2Q6IFH4 312 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 TSSK4Q6SA08 328 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 Q6ZS52 159 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 ZNF571Q7Z3V5 609 aaPredicted RBP16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 DNAAF5Q86Y56 855 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 BBS7Q8IWZ6 715 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 ADGRG2Q8IZP9 1017 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 ZNF276Q8N554 614 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 IRGQQ8WZA9 623 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 CD101Q93033 1021 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 FAM149B1Q96BN6 582 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 ABCC13Q9NSE7 274 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 SEPT11Q9NVA2 429 aaKnown RBP16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 SFMBT1Q9UHJ3 866 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 NAALADL1Q9UQQ1 740 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 FANCMQ8IYD8 2048 aa16.39■□□□□ 0.21
CLK3P2-201ENST00000427566 GREM1O60565 184 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 LSM8O95777 96 aaKnown RBP16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 EGFP01133 1207 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 SP9P0CG40 484 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 GABRB2P47870 512 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 ZBED6P86452 979 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 DHCR24Q15392 516 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 TMEM196Q5HYL7 178 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 HGSNATQ68CP4 663 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 FSTL4Q6MZW2 842 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 KLHDC10Q6PID8 442 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 OLFML1Q6UWY5 402 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 PHLDB2Q86SQ0 1253 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 ALYREFQ86V81 257 aaKnown RBP16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 ERICH1Q86X53 443 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 KIAA1524Q8TCG1 905 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 NOX5Q96PH1 765 aa16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 CDK5RAP1Q96SZ6 601 aaKnown RBP16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 FBRSL1Q9HCM7 1045 aaKnown RBP16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 LUC7L2Q9Y383 392 aaKnown RBP16.38■□□□□ 0.21
CLK3P2-201ENST00000427566 TRDMT1O14717 391 aaKnown RBP16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 MSI1O43347 362 aaKnown RBP16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 ADH1CP00326 375 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 PLEKP08567 350 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms