RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 TGM1P22735 817 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 GBP1P32455 592 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 ZNF132P52740 706 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 DAOAP59103 153 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 ARHGAP8P85298 464 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 ELF2Q15723 593 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 RSPO4Q2I0M5 234 aaPredicted RBP19.28■□□□□ 0.68
GPC1-205ENST00000427506 TMEM92Q6UXU6 159 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 GBP6Q6ZN66 633 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 ENOSF1Q7L5Y1 443 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 FMNL3Q8IVF7 1028 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 KCNV2Q8TDN2 545 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 GOLGA1Q92805 767 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 PLD4Q96BZ4 506 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 ARRDC1-AS1Q9H2J1 176 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 BCCIPQ9P287 314 aaKnown RBP eCLIP19.28■□□□□ 0.68
GPC1-205ENST00000427506 SFMBT1Q9UHJ3 866 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 DACH1Q9UI36 760 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 GPR179Q6PRD1 2367 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 MYOFQ9NZM1 2061 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 KIAA1549LQ6ZVL6 1849 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 DCLK1O15075 740 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 RHOBTB1O94844 696 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 CYBBP04839 570 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 SLC9A1P19634 815 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 SDHBP21912 280 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 USP8P40818 1118 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 HARS2P49590 506 aaKnown RBP19.27■□□□□ 0.68
GPC1-205ENST00000427506 SDE2Q6IQ49 451 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 TRIM65Q6PJ69 517 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 TOGARAM2Q6ZUX3 1019 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 RASSF3Q86WH2 238 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 FAM114A1Q8IWE2 563 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 SCML4Q8N228 414 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 PGBD3Q8N328 593 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 MDGA1Q8NFP4 955 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 LOXL4Q96JB6 756 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 HSFY1Q96LI6 401 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 FAM81BQ96LP2 452 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 MIS12Q9H081 205 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 ST7Q9NRC1 585 aa19.27■□□□□ 0.68
GPC1-205ENST00000427506 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.27■□□□□ 0.68
GPC1-205ENST00000427506 MED7O43513 233 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 LETM1O95202 739 aaPredicted RBP19.26■□□□□ 0.67
GPC1-205ENST00000427506 HNRNPLP14866 589 aaKnown RBP eCLIP19.26■□□□□ 0.67
GPC1-205ENST00000427506 WASP42768 502 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 PUM1Q14671 1186 aaKnown RBP eCLIP19.26■□□□□ 0.67
GPC1-205ENST00000427506 CSRP2Q16527 193 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 ARHGAP44Q17R89 818 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 EXOC3L4Q17RC7 722 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 DPCR1Q3MIW9 517 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 PLK5Q496M5 336 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 GJB7Q6PEY0 223 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 IRF2BP1Q8IU81 584 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 HMGB4Q8WW32 186 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 IRGQQ8WZA9 623 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 ZC3H10Q96K80 434 aaKnown RBP19.26■□□□□ 0.67
GPC1-205ENST00000427506 THAP9Q9H5L6 903 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 CDV3Q9UKY7 258 aaKnown RBP19.26■□□□□ 0.67
GPC1-205ENST00000427506 CNTN6Q9UQ52 1028 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 STARD13Q9Y3M8 1113 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 HBS1LQ9Y450 684 aaKnown RBP19.26■□□□□ 0.67
GPC1-205ENST00000427506 ZNF292O60281 2723 aa19.26■□□□□ 0.67
GPC1-205ENST00000427506 TCRBV21S2A2A0A5A6 115 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 THAP12O43422 761 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 ADAM23O75077 832 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 GABBR2O75899 941 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 FBXO21O94952 628 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 EPN2O95208 641 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 LTFP02788 710 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 CISD3P0C7P0 127 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 CHRM1P11229 460 aaPredicted RBP19.25■□□□□ 0.67
GPC1-205ENST00000427506 HOXB2P14652 356 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 GNA15P30679 374 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 NTSR1P30989 418 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 TRIP4Q15650 581 aaPredicted RBP19.25■□□□□ 0.67
GPC1-205ENST00000427506 CCDC6Q16204 474 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 FYB2Q5VWT5 728 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 EGFLAMQ63HQ2 1017 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 PRR23CQ6ZRP0 262 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 C11orf74Q86VG3 221 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 CHPFQ8IZ52 775 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 CLEC4CQ8WTT0 213 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 DDI1Q8WTU0 396 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 DUSP15Q9H1R2 295 aaPredicted RBP19.25■□□□□ 0.67
GPC1-205ENST00000427506 APEX2Q9UBZ4 518 aa19.25■□□□□ 0.67
GPC1-205ENST00000427506 PRRT4C9JH25 899 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 ZBTB24O43167 697 aaPredicted RBP19.24■□□□□ 0.67
GPC1-205ENST00000427506 MSI1O43347 362 aaKnown RBP19.24■□□□□ 0.67
GPC1-205ENST00000427506 FOXD2O60548 495 aaPredicted RBP19.24■□□□□ 0.67
GPC1-205ENST00000427506 PENKP01210 267 aaPredicted RBP19.24■□□□□ 0.67
GPC1-205ENST00000427506 PRKCSHP14314 528 aaPredicted RBP19.24■□□□□ 0.67
GPC1-205ENST00000427506 ERCC5P28715 1186 aaPredicted RBP19.24■□□□□ 0.67
GPC1-205ENST00000427506 GPD2P43304 727 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 MAN2A1Q16706 1144 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 HSP90AA4PQ58FG1 418 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 DENND1BQ6P3S1 775 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 CLEC17AQ6ZS10 378 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 ERMP1Q7Z2K6 904 aa19.24■□□□□ 0.67
GPC1-205ENST00000427506 DGLUCYQ7Z3D6 616 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms