RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 H7C0C1 242 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 STIP1P31948 543 aaKnown RBP27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 RPL22P35268 128 aaKnown RBP27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 GRIK1P39086 918 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 ARL4AP40617 200 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 ATP5OP48047 213 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 IFFO1Q0D2I5 559 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 MRPL58Q14197 206 aaKnown RBP27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 FAM171A1Q5VUB5 890 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 FAM76AQ8TAV0 307 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 NTAN1Q96AB6 310 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 PWWP2AQ96N64 755 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 TMEM175Q9BSA9 504 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 GPR62Q9BZJ7 368 aa27.62■■■□□ 2.01
SH3GL3-202ENST00000427482 PLXNA3P51805 1871 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 TBKBP1A7MCY6 615 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 TNFRSF10BO14763 440 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 SHBGP04278 402 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 GOT1P17174 413 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 NFE2Q16621 373 aaPredicted RBP27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 BSPRYQ5W0U4 402 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 CEP128Q6ZU80 1094 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 PCGF5Q86SE9 256 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 RELL1Q8IUW5 271 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 SCAMP5Q8TAC9 235 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 ADAM32Q8TC27 787 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 EDEM1Q92611 657 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 EXOC4Q96A65 974 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 FUBP3Q96I24 572 aaKnown RBP eCLIP27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 PKNOX2Q96KN3 472 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 TRIM62Q9BVG3 475 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 PRDM16Q9HAZ2 1276 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 TMPRSS4Q9NRS4 437 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 SHOC2Q9UQ13 582 aa27.61■■■□□ 2.01
SH3GL3-202ENST00000427482 FGFR3P22607 806 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 SLC5A3P53794 718 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 BEND5Q7L4P6 421 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 DEFB128Q7Z7B8 93 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 ZNF333Q96JL9 665 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 DNAJC17Q9NVM6 304 aaKnown RBP27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 ABI2Q9NYB9 513 aaPredicted RBP27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 TBX21Q9UL17 535 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 FARP1Q9Y4F1 1045 aaPredicted RBP27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 SF3B1O75533 1304 aaKnown RBP eCLIP27.6■■■□□ 2.014e-7■■■■■ 87.5
SH3GL3-202ENST00000427482 CFAP69A5D8W1 941 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 HMGB1P1B2RPK0 211 aaPredicted RBP27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 ADRA1BP35368 520 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 SCAPQ12770 1279 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 CTXN3Q4LDR2 81 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 EFHC2Q5JST6 749 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 KCTD16Q68DU8 428 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 DIS3LQ8TF46 1054 aaKnown RBP27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 USP29Q9HBJ7 922 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 DDIT4Q9NX09 232 aa27.6■■■□□ 2.01
SH3GL3-202ENST00000427482 BCLAF3A2AJT9 711 aaKnown RBP27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 H3BRJ5 948 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 F9P00740 461 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 AMPD1P23109 780 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 NR2C2P49116 596 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 CTCFP49711 727 aaPredicted RBP27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 KRT71Q3SY84 523 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 NCBP2-AS2Q69YL0 99 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 ZNF280DQ6N043 979 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 B4GALNT4Q76KP1 1039 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 CEP57Q86XR8 500 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 RNF139Q8WU17 664 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 PRCCQ92733 491 aaPredicted RBP27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 RTP4Q96DX8 246 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 LRRC4CQ9HCJ2 640 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 FBXW11Q9UKB1 542 aa27.59■■■□□ 2.01
SH3GL3-202ENST00000427482 OR6C75A6NL08 312 aa27.58■■■□□ 2.01
SH3GL3-202ENST00000427482 GALTP07902 379 aa27.58■■■□□ 2.01
SH3GL3-202ENST00000427482 GBE1Q04446 702 aa27.58■■■□□ 2.01
SH3GL3-202ENST00000427482 FUT10Q6P4F1 479 aa27.58■■■□□ 2.01
SH3GL3-202ENST00000427482 LRRC43Q8N309 656 aa27.58■■■□□ 2.01
SH3GL3-202ENST00000427482 SH2D3CQ8N5H7 860 aa27.58■■■□□ 2.01
SH3GL3-202ENST00000427482 ARHGEF4Q9NR80 690 aa27.58■■■□□ 2.01
SH3GL3-202ENST00000427482 LTBP2Q14767 1821 aa27.58■■■□□ 2.01
SH3GL3-202ENST00000427482 TTC4O95801 387 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 XRCC4Q13426 336 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 AGBL2Q5U5Z8 902 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 VSTM1Q6UX27 236 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 HOOK3Q86VS8 718 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 SCN4BQ8IWT1 228 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 PPIL6Q8IXY8 311 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 CPT1BQ92523 772 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 RBM15Q96T37 977 aaKnown RBP eCLIP27.57■■■□□ 2
SH3GL3-202ENST00000427482 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.57■■■□□ 2
SH3GL3-202ENST00000427482 NINJ2Q9NZG7 142 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 PCDHB5Q9Y5E4 795 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.57■■■□□ 2
SH3GL3-202ENST00000427482 CXCR3P49682 368 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 SLC10A2Q12908 348 aaPredicted RBP27.57■■■□□ 2
SH3GL3-202ENST00000427482 ELAVL2Q12926 359 aaKnown RBP27.57■■■□□ 2
SH3GL3-202ENST00000427482 CDKL3Q8IVW4 592 aaPredicted RBP27.57■■■□□ 2
SH3GL3-202ENST00000427482 B3GALT6Q96L58 329 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 TMEM109Q9BVC6 243 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 CENPHQ9H3R5 247 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 ANLNQ9NQW6 1124 aa27.57■■■□□ 2
SH3GL3-202ENST00000427482 ETNK2Q9NVF9 386 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms