RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 PTPRJQ12913 1337 aa9.73□□□□□ -0.85
LSG1-202ENST00000427461 PMS2P1A4D2B8 440 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 TISP43B9A030 160 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 GABRDO14764 452 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 HNRNPDLO14979 420 aaKnown RBP9.72□□□□□ -0.85
LSG1-202ENST00000427461 GREM1O60565 184 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 HUS1O60921 280 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 CSO75390 466 aaKnown RBP9.72□□□□□ -0.85
LSG1-202ENST00000427461 EPHX1P07099 455 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 CDH8P55286 799 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 WNT7BP56706 349 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 RACK1P63244 317 aaKnown RBP9.72□□□□□ -0.85
LSG1-202ENST00000427461 NOP14P78316 857 aaKnown RBP9.72□□□□□ -0.85
LSG1-202ENST00000427461 E2F1Q01094 437 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 SKIDA1Q1XH10 827 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 C3orf38Q5JPI3 329 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 TDRD10Q5VZ19 366 aaKnown RBP9.72□□□□□ -0.85
LSG1-202ENST00000427461 HAUS3Q68CZ6 603 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 VSTM1Q6UX27 236 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 C4orf50Q6ZRC1 276 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 ZNF274Q96GC6 653 aaPredicted RBP9.72□□□□□ -0.85
LSG1-202ENST00000427461 ZNF560Q96MR9 790 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 SLITRK1Q96PX8 696 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 SYT15Q9BQS2 421 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 BTBD1Q9H0C5 482 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 LHX5Q9H2C1 402 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 ASB7Q9H672 318 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 AGAP1Q9UPQ3 857 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 SATB2Q9UPW6 733 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 SNX9Q9Y5X1 595 aa9.72□□□□□ -0.85
LSG1-202ENST00000427461 NPHP3-ACAD11A0A0J9YXS1 232 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 FAM47DPA6NHR8 397 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 ANKRD63C9JTQ0 380 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 TRIM38O00635 465 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 SIGLEC6O43699 453 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 SDC3O75056 442 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 ITGB3P05106 788 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 OR52Z1P0C646 297 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 PLCG1P19174 1290 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 PCSK1P29120 753 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 ZNF132P52740 706 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 SMTNP53814 917 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 BCAT1P54687 386 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 FOXK1P85037 733 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 ZNF174Q15697 407 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 SOWAHAQ2M3V2 549 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 TMEM86AQ8N2M4 240 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 ZNF366Q8N895 744 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 SNX29Q8TEQ0 813 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 PCED1BQ96HM7 432 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 CCNL2Q96S94 520 aaPredicted RBP9.71□□□□□ -0.86
LSG1-202ENST00000427461 GZF1Q9H116 711 aaPredicted RBP9.71□□□□□ -0.86
LSG1-202ENST00000427461 OSBPL2Q9H1P3 480 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 MARK1Q9P0L2 795 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 WDR35Q9P2L0 1181 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 PLEKHB1Q9UF11 243 aaPredicted RBP9.71□□□□□ -0.86
LSG1-202ENST00000427461 DNM3Q9UQ16 869 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 LRBAP50851 2863 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 NBASA2RRP1 2371 aa9.71□□□□□ -0.86
LSG1-202ENST00000427461 ZFC3H1O60293 1989 aaKnown RBP9.7□□□□□ -0.86
LSG1-202ENST00000427461 A0A1W2PPC4 97 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 A0A1W2PR77 199 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 PP2D1A8MPX8 630 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 OPA1O60313 960 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 CTDNEP1O95476 244 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 CD38P28907 300 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 PNPLA4P41247 253 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 LHX1P48742 406 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 ARRB1P49407 418 aaPredicted RBP9.7□□□□□ -0.86
LSG1-202ENST00000427461 PGFP49763 221 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 MFAP3P55082 362 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 NCKAP1LP55160 1127 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 GRIN1Q05586 938 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 SGO2Q562F6 1265 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 HECTD3Q5T447 861 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 KIAA0895LQ68EN5 471 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 FOXR1Q6PIV2 292 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 USP53Q70EK8 1073 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 HTR3DQ70Z44 454 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 DIS3L2Q8IYB7 885 aaKnown RBP9.7□□□□□ -0.86
LSG1-202ENST00000427461 C1orf127Q8N9H9 656 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 OR2T3Q8NH03 318 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 FBXO32Q969P5 355 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 PRR11Q96HE9 360 aaPredicted RBP9.7□□□□□ -0.86
LSG1-202ENST00000427461 SLC46A1Q96NT5 459 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 DEPDC7Q96QD5 511 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 DUSP9Q99956 384 aaKnown RBP9.7□□□□□ -0.86
LSG1-202ENST00000427461 SEMA3CQ99985 751 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 CAAP1Q9H8G2 361 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 BRMS1Q9HCU9 246 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 GDF3Q9NR23 364 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 AASDHPPTQ9NRN7 309 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 EHD2Q9NZN4 543 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
LSG1-202ENST00000427461 FBXO10Q9UK96 956 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
LSG1-202ENST00000427461 KIF26BQ2KJY2 2108 aa9.7□□□□□ -0.86
LSG1-202ENST00000427461 SPTBN1Q01082 2364 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms