RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.83□□□□□ -1.96
PTPRC-208ENST00000427110 VPS51Q9UID3 782 aa2.83□□□□□ -1.96
PTPRC-208ENST00000427110 CA14Q9ULX7 337 aa2.83□□□□□ -1.96
PTPRC-208ENST00000427110 SH2B3Q9UQQ2 575 aa2.83□□□□□ -1.96
PTPRC-208ENST00000427110 COL3A1P02461 1466 aaPredicted RBP2.83□□□□□ -1.96
PTPRC-208ENST00000427110 CACNA1IQ9P0X4 2223 aa2.83□□□□□ -1.96
PTPRC-208ENST00000427110 FNDC1Q4ZHG4 1894 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 HMX3A6NHT5 357 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 LINC01548A6NM66 108 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 DNPH1O43598 174 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 CREB3O43889 395 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 PMPCBO75439 489 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 PRKCGP05129 697 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 FAM163BP0C2L3 166 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 CDK4P11802 303 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 GYS1P13807 737 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 CREB1P16220 341 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 FPR3P25089 353 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 CTGFP29279 349 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 GKP32189 559 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 SERPINF1P36955 418 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 PBX1P40424 430 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 GSTM5P46439 218 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 EEFSECP57772 596 aaKnown RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 BIRC3Q13489 604 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 ATP1A4Q13733 1029 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 CSHL1Q14406 222 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 CLCA4Q14CN2 919 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 RPS6KA2Q15349 733 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 TMEM196Q5HYL7 178 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 PAPD7Q5XG87 772 aaKnown RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 SULT6B1Q6IMI4 303 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 RFX8Q6ZV50 586 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 WDR53Q7Z5U6 358 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 GLCCI1Q86VQ1 547 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 NRSN1Q8IZ57 195 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 CACNA2D3Q8IZS8 1091 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 CPXCR1Q8N123 301 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 NKAPQ8N5F7 415 aaKnown RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 METTL25Q8N6Q8 603 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 ABHD11Q8NFV4 315 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 RP9Q8TA86 221 aaKnown RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 WDR60Q8WVS4 1066 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 TRAPPC12Q8WVT3 735 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 PRR25Q96S07 402 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 BRD8Q9H0E9 1235 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 MAGEH1Q9H213 219 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 AGO4Q9HCK5 861 aaKnown RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 SNX15Q9NRS6 342 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 DUSP22Q9NRW4 184 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 LPAR3Q9UBY5 353 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 HERC5Q9UII4 1024 aaKnown RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 SCAF8Q9UPN6 1271 aaKnown RBP2.82□□□□□ -1.96
PTPRC-208ENST00000427110 DTNAQ9Y4J8 743 aa2.82□□□□□ -1.96
PTPRC-208ENST00000427110 SETD1BQ9UPS6 1966 aaKnown RBP2.81□□□□□ -1.96
PTPRC-208ENST00000427110 OR2W5A6NFC9 320 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 TISP43B9A030 160 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 PCDH17O14917 1159 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 CA12O43570 354 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 NTSR2O95665 410 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 ANXA6P08133 673 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 CELA2AP08217 269 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 ITGA5P08648 1049 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 CYP2D6P10635 497 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 KLRK1P26718 216 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 HTR7P34969 479 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 ZNF81P51508 661 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 SOX10P56693 466 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 AP2B1P63010 937 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 RAPGEF1Q13905 1077 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 POSTNQ15063 836 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 SRSF7Q16629 238 aaKnown RBP eCLIP2.81□□□□□ -1.96
PTPRC-208ENST00000427110 CYP1B1Q16678 543 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 PROSER3Q2NL68 480 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 BTBD16Q32M84 506 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 TBC1D25Q3MII6 688 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 CEP78Q5JTW2 689 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 ATPAF1Q5TC12 328 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-208ENST00000427110 ANKRD45Q5TZF3 282 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 PRAMEF17Q5VTA0 474 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 SUMO4Q6EEV6 95 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 LIN54Q6MZP7 749 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 CEP85Q6P2H3 762 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 PTCHD4Q6ZW05 846 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 Q6ZWC4 215 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 PARS2Q7L3T8 475 aaKnown RBP2.81□□□□□ -1.96
PTPRC-208ENST00000427110 PTF1AQ7RTS3 328 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 ZNF804AQ7Z570 1209 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 ZNF354CQ86Y25 554 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 GALNT15Q8N3T1 639 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 MYRIPQ8NFW9 859 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 SUN3Q8TAQ9 357 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 RSPRY1Q96DX4 576 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 WDYHV1Q96HA8 205 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 HS6ST2Q96MM7 605 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 RTKNQ9BST9 563 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 FAM167BQ9BTA0 163 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 QTRT1Q9BXR0 403 aaKnown RBP2.81□□□□□ -1.96
PTPRC-208ENST00000427110 KRTAP9-8Q9BYQ0 159 aa2.81□□□□□ -1.96
PTPRC-208ENST00000427110 USP29Q9HBJ7 922 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms