RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 PFKMP08237 780 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 SLC34A1Q06495 639 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 SMC1BQ8NDV3 1235 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 DEPDC1BQ8WUY9 529 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 PHACTR1Q9C0D0 580 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 CYP4F11Q9HBI6 524 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 KRT82Q9NSB4 513 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 ZNF358Q9NW07 568 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 FETUBQ9UGM5 382 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 C19orf81C9J6K1 198 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 SMIM24O75264 130 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 APOEP02649 317 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 PGGT1BP53609 377 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 DALRD3Q5D0E6 543 aaKnown RBP14.89□□□□□ -0.03
ERCC3-202ENST00000426778 PPM1JQ5JR12 505 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 RIPOR1Q6ZS17 1223 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 ZNF534Q76KX8 674 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 TTC30AQ86WT1 665 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 ADGRF2Q8IZF7 708 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 PANX3Q96QZ0 392 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 LGMNQ99538 433 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 MRPL45Q9BRJ2 306 aaKnown RBP14.89□□□□□ -0.03
ERCC3-202ENST00000426778 KLC2Q9H0B6 622 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 FZD8Q9H461 694 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 SEPT10Q9P0V9 454 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 PAK5Q9P286 719 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 WDR35Q9P2L0 1181 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 ZNF112Q9UJU3 913 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 HES2Q9Y543 173 aa14.89□□□□□ -0.03
ERCC3-202ENST00000426778 CHADO15335 359 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 GABBR2O75899 941 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 C6orf222P0C671 652 aaPredicted RBP14.88□□□□□ -0.03
ERCC3-202ENST00000426778 VGLL4Q14135 290 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 GSTCDQ8NEC7 633 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 C12orf42Q96LP6 360 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 SPATC1LQ9H0A9 340 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 IFT122Q9HBG6 1241 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 SNX9Q9Y5X1 595 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 PSAT1Q9Y617 370 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 PDGFRBP09619 1106 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 SP100P23497 879 aaPredicted RBP14.88□□□□□ -0.03
ERCC3-202ENST00000426778 CYP2F1P24903 491 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 HMGB2P26583 209 aaKnown RBP14.88□□□□□ -0.03
ERCC3-202ENST00000426778 EPHB1P54762 984 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 TFDP2Q14188 446 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 RALGPS1Q5JS13 557 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 KCNT2Q6UVM3 1135 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 LBX2Q6XYB7 198 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 MOB2Q70IA6 237 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 ILDR2Q71H61 639 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 CCNJLQ8IV13 435 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 TP53INP2Q8IXH6 220 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 CXorf38Q8TB03 319 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 CLMNQ96JQ2 1002 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 PPP1R36Q96LQ0 422 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 CAMKK2Q96RR4 588 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 DPEP3Q9H4B8 488 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 SLC7A8Q9UHI5 535 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 PPM1HQ9ULR3 514 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 NME7Q9Y5B8 376 aa14.88□□□□□ -0.03
ERCC3-202ENST00000426778 LOC100653049A0A140TA62 436 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 ARHGAP42A6NI28 874 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 KRT34O76011 436 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 PDE5AO76074 875 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 LCP1P13796 627 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 ACADSP16219 412 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 HDAC4P56524 1084 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 GRM1Q13255 1194 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 SURF1Q15526 300 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 Q3C1V9 767 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 C1orf146Q5VVC0 180 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 SH3TC2Q8TF17 1288 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 ZNF483Q8TF39 744 aaPredicted RBP14.87□□□□□ -0.03
ERCC3-202ENST00000426778 PYDC1Q8WXC3 89 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 TXNRD2Q9NNW7 524 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 DNAJC6O75061 913 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 ENDOD1O94919 500 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 CD1EP15812 388 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 ARF4P18085 180 aaPredicted RBP14.87□□□□□ -0.03
ERCC3-202ENST00000426778 ADORA2BP29275 332 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 SDC4P31431 198 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 RABGGTBP53611 331 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 OCRLQ01968 901 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 TEX44Q53QW1 395 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 CRLF3Q8IUI8 442 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 ULK2Q8IYT8 1036 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 STKLD1Q8NE28 680 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 CHST13Q8NET6 341 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 FAM136AQ96C01 138 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 SIGLEC10Q96LC7 697 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 ZNF778Q96MU6 729 aa14.87□□□□□ -0.03
ERCC3-202ENST00000426778 NDC80O14777 642 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 PAPSS1O43252 624 aaPredicted RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 USP12O75317 370 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 ZNF286BP0CG31 522 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 TXNP10599 105 aaKnown RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 GRIK3Q13003 919 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 FASTKD1Q53R41 847 aaKnown RBP14.86□□□□□ -0.03
ERCC3-202ENST00000426778 SCUBE1Q8IWY4 988 aa14.86□□□□□ -0.03
ERCC3-202ENST00000426778 CCDC185Q8N715 623 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms