RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 RAD54BQ9Y620 910 aa10.57□□□□□ -0.72
GACAT3-201ENST00000426539 THADAQ6YHU6 1953 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 MAP1BP46821 2468 aaKnown RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 WASH3PC4AMC7 463 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 ZNF202O95125 648 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 PENKP01210 267 aaPredicted RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 HOXB3P14651 431 aaPredicted RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 ENGP17813 658 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 CSRP1P21291 193 aaKnown RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 RPL13P26373 211 aaKnown RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 DGKGP49619 791 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 RAD23BP54727 409 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 GOLGA8FQ08AF8 430 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 GOLGA8DPQ0D2H9 430 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 ZNF252P-AS1Q0IIN9 211 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 BYSLQ13895 437 aaKnown RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 EDRF1Q3B7T1 1238 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 UAP1L1Q3KQV9 507 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 RAB41Q5JT25 222 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 SPDYCQ5MJ68 293 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 FYB2Q5VWT5 728 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 KRT39Q6A163 491 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 SLC23A3Q6PIS1 610 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 BHLHA9Q7RTU4 235 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 SLC41A1Q8IVJ1 513 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 CHPFQ8IZ52 775 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 DEFB124Q8NES8 71 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 TATDN2Q93075 761 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 HEXIM2Q96MH2 286 aaKnown RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 XPO6Q96QU8 1125 aaKnown RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 GDPD2Q9HCC8 539 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 CISHQ9NSE2 258 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 CACNA2D2Q9NY47 1150 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 CLIC5Q9NZA1 410 aa10.56□□□□□ -0.72
GACAT3-201ENST00000426539 LSM7Q9UK45 103 aaKnown RBP10.56□□□□□ -0.72
GACAT3-201ENST00000426539 NUP205Q92621 2012 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 TULP2O00295 520 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 HMBSP08397 361 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 CEACAM1P13688 526 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 SPINK2P20155 84 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 MAPK8P45983 427 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 MXI1P50539 228 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 PMS1P54277 932 aaKnown RBP10.55□□□□□ -0.72
GACAT3-201ENST00000426539 RPL6Q02878 288 aaKnown RBP10.55□□□□□ -0.72
GACAT3-201ENST00000426539 ZNF33AQ06730 810 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 LMAN2Q12907 356 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 GEN1Q17RS7 908 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 CBWD6Q4V339 395 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 CBWD3Q5JTY5 395 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 CBWD5Q5RIA9 395 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 ARHGAP17Q68EM7 881 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 NUDT18Q6ZVK8 323 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 PIGZQ86VD9 579 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 RBBP8NLQ8NC74 664 aaPredicted RBP10.55□□□□□ -0.72
GACAT3-201ENST00000426539 FBXL13Q8NEE6 735 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 NDRG1Q92597 394 aaKnown RBP10.55□□□□□ -0.72
GACAT3-201ENST00000426539 CCDC47Q96A33 483 aaKnown RBP10.55□□□□□ -0.72
GACAT3-201ENST00000426539 TMEM176AQ96HP8 235 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 FAXDC2Q96IV6 333 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 MRGPRX1Q96LB2 322 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 NUSAP1Q9BXS6 441 aaKnown RBP10.55□□□□□ -0.72
GACAT3-201ENST00000426539 UBXN6Q9BZV1 441 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 CAPN10Q9HC96 672 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 RAB20Q9NX57 234 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 RASAL2Q9UJF2 1139 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 AGO1Q9UL18 857 aaKnown RBP10.55□□□□□ -0.72
GACAT3-201ENST00000426539 CLEC4EQ9ULY5 219 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 SLC27A6Q9Y2P4 619 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 TNRC6BQ9UPQ9 1833 aaKnown RBP10.55□□□□□ -0.72
GACAT3-201ENST00000426539 CHD8Q9HCK8 2581 aa10.55□□□□□ -0.72
GACAT3-201ENST00000426539 MYO18AQ92614 2054 aaKnown RBP10.54□□□□□ -0.72
GACAT3-201ENST00000426539 C1QTNF9BB2RNN3 333 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 GFRA2O00451 464 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 AP5Z1O43299 807 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 ZNF217O75362 1048 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 C1QTNF9P0C862 333 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 RALAP11233 206 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 TRIM21P19474 475 aaKnown RBP10.54□□□□□ -0.72
GACAT3-201ENST00000426539 CORO1AP31146 461 aaKnown RBP10.54□□□□□ -0.72
GACAT3-201ENST00000426539 HOXD12P35452 270 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 PRCPP42785 496 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 MFAP3P55082 362 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 YWHAGP61981 247 aaKnown RBP eCLIP10.54□□□□□ -0.72
GACAT3-201ENST00000426539 EFEMP1Q12805 493 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 FOXC1Q12948 553 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 SEMA3BQ13214 749 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 PNOCQ13519 176 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 ENPP2Q13822 863 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 DUOXA1Q1HG43 343 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 SLC36A4Q6YBV0 504 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 PIP4P1Q86T03 277 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 TADA2BQ86TJ2 420 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 ZC3H3Q8IXZ2 948 aaKnown RBP10.54□□□□□ -0.72
GACAT3-201ENST00000426539 ANKRD52Q8NB46 1076 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 OR2I1PQ8NGU4 316 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
GACAT3-201ENST00000426539 PIWIL1Q96J94 861 aaKnown RBP10.54□□□□□ -0.72
GACAT3-201ENST00000426539 SCAND2PQ9GZW5 306 aaPredicted RBP10.54□□□□□ -0.72
GACAT3-201ENST00000426539 SLC6A14Q9UN76 642 aa10.54□□□□□ -0.72
GACAT3-201ENST00000426539 CYP8B1Q9UNU6 501 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms