RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 C1orf131Q8NDD1 294 aaKnown RBP14.25□□□□□ -0.13
SNX3-204ENST00000426155 RNF139Q8WU17 664 aa14.25□□□□□ -0.13
SNX3-204ENST00000426155 NELL1Q92832 810 aa14.25□□□□□ -0.13
SNX3-204ENST00000426155 IER2Q9BTL4 223 aa14.25□□□□□ -0.13
SNX3-204ENST00000426155 FUCA2Q9BTY2 467 aa14.25□□□□□ -0.13
SNX3-204ENST00000426155 SLC4A5Q9BY07 1137 aa14.25□□□□□ -0.13
SNX3-204ENST00000426155 ABCC13Q9NSE7 274 aa14.25□□□□□ -0.13
SNX3-204ENST00000426155 FAM207AQ9NSI2 230 aaPredicted RBP14.25□□□□□ -0.13
SNX3-204ENST00000426155 PLK2Q9NYY3 685 aa14.25□□□□□ -0.13
SNX3-204ENST00000426155 AGO1Q9UL18 857 aaKnown RBP14.25□□□□□ -0.13
SNX3-204ENST00000426155 STRIP2Q9ULQ0 834 aa14.25□□□□□ -0.13
SNX3-204ENST00000426155 MYO18AQ92614 2054 aaKnown RBP14.25□□□□□ -0.13
SNX3-204ENST00000426155 SYCE3A1L190 88 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 PRR23AA6NEV1 266 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 CHURC1-FNTBB4DL54 471 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 PROB1E7EW31 1015 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 F8VZ95 297 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 HOXC11O43248 304 aaPredicted RBP14.24□□□□□ -0.13
SNX3-204ENST00000426155 TULP3O75386 442 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 KAT7O95251 611 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 FYNP06241 537 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 TYRP14679 529 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 RPL34P49207 117 aaKnown RBP14.24□□□□□ -0.13
SNX3-204ENST00000426155 FNTBP49356 437 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 COG7P83436 770 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 PTK2Q05397 1052 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 C2orf27AQ580R0 203 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 TAF3Q5VWG9 929 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 DHX40Q8IX18 779 aaKnown RBP14.24□□□□□ -0.13
SNX3-204ENST00000426155 FAM71AQ8IYT1 594 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 ADAM32Q8TC27 787 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 IRGQQ8WZA9 623 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 FAM149B1Q96BN6 582 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 CPXM1Q96SM3 734 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 PNKPQ96T60 521 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 BBS2Q9BXC9 721 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 ARHGEF4Q9NR80 690 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 OLA1Q9NTK5 396 aaKnown RBP14.24□□□□□ -0.13
SNX3-204ENST00000426155 LIMA1Q9UHB6 759 aaKnown RBP14.24□□□□□ -0.13
SNX3-204ENST00000426155 SIK3Q9Y2K2 1263 aa14.24□□□□□ -0.13
SNX3-204ENST00000426155 GFRA3O60609 400 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 FBXO21O94952 628 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 CHRM1P11229 460 aaPredicted RBP14.23□□□□□ -0.13
SNX3-204ENST00000426155 POLR2FP61218 127 aaKnown RBP14.23□□□□□ -0.13
SNX3-204ENST00000426155 SRSF5Q13243 272 aaKnown RBP14.23□□□□□ -0.13
SNX3-204ENST00000426155 SYCP1Q15431 976 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 TAF5Q15542 800 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 TRIP4Q15650 581 aaPredicted RBP14.23□□□□□ -0.13
SNX3-204ENST00000426155 MEA1Q16626 185 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 KLHL40Q2TBA0 621 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 FKBP15Q5T1M5 1219 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 EMC10Q5UCC4 262 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 MSANTD2Q6P1R3 559 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 MAMSTRQ6ZN01 415 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 TOGARAM2Q6ZUX3 1019 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 ZBTB44Q8NCP5 570 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 NKD2Q969F2 451 aaPredicted RBP14.23□□□□□ -0.13
SNX3-204ENST00000426155 PLD4Q96BZ4 506 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 HHIPQ96QV1 700 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 NLRC4Q9NPP4 1024 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 DNAJC17Q9NVM6 304 aaKnown RBP14.23□□□□□ -0.13
SNX3-204ENST00000426155 ZSCAN32Q9NX65 697 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 PCDHGC3Q9UN70 934 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 NAALADL1Q9UQQ1 740 aa14.23□□□□□ -0.13
SNX3-204ENST00000426155 LGALS16A8MUM7 142 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 PAPSS2O95340 614 aaPredicted RBP14.22□□□□□ -0.13
SNX3-204ENST00000426155 ERBB2P04626 1255 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 APODP05090 189 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 TPM2P07951 284 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 NCAM1P13591 858 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 CYP11B1P15538 503 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 TIE1P35590 1138 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 EIF2DP41214 584 aaKnown RBP14.22□□□□□ -0.13
SNX3-204ENST00000426155 ACADSBP45954 432 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
SNX3-204ENST00000426155 PITX1P78337 314 aaPredicted RBP14.22□□□□□ -0.13
SNX3-204ENST00000426155 FBXO43Q4G163 708 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 PTPN20Q4JDL3 420 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 FYB2Q5VWT5 728 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 ZC3H14Q6PJT7 736 aaKnown RBP14.22□□□□□ -0.13
SNX3-204ENST00000426155 FAM183BPQ6ZVS7 135 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 TMEM110Q86TL2 294 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 NOP9Q86U38 636 aaKnown RBP14.22□□□□□ -0.13
SNX3-204ENST00000426155 CCDC33Q8N5R6 958 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 DQX1Q8TE96 717 aaKnown RBP14.22□□□□□ -0.13
SNX3-204ENST00000426155 USP33Q8TEY7 942 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 STK32AQ8WU08 396 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 GOLGA1Q92805 767 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 EXOC4Q96A65 974 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 MARK1Q9P0L2 795 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 PCDHGA2Q9Y5H1 932 aa14.22□□□□□ -0.13
SNX3-204ENST00000426155 CACNG3O60359 315 aa14.21□□□□□ -0.13
SNX3-204ENST00000426155 TSPAN3O60637 253 aa14.21□□□□□ -0.13
SNX3-204ENST00000426155 LILRB5O75023 590 aa14.21□□□□□ -0.13
SNX3-204ENST00000426155 GRAP2O75791 330 aa14.21□□□□□ -0.13
SNX3-204ENST00000426155 GFPT2O94808 682 aa14.21□□□□□ -0.13
SNX3-204ENST00000426155 HNRNPLP14866 589 aaKnown RBP eCLIP14.21□□□□□ -0.13
SNX3-204ENST00000426155 CDK11BP21127 795 aaKnown RBP14.21□□□□□ -0.13
SNX3-204ENST00000426155 KRT9P35527 623 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms