RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 RPSAP08865 295 aaKnown RBP11.08□□□□□ -0.64
CUX1-205ENST00000425244 SARNPP82979 210 aaKnown RBP11.08□□□□□ -0.64
CUX1-205ENST00000425244 CDC42EP1Q00587 391 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 TFDP2Q14188 446 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 NOMO1Q15155 1222 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 FYB2Q5VWT5 728 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 SCUBE3Q8IX30 993 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 RNF169Q8NCN4 708 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 MAGEC3Q8TD91 643 aa11.08□□□□□ -0.64
CUX1-205ENST00000425244 LPXNO60711 386 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 CBX6O95503 412 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 ZBED1O96006 694 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 SLC18A1P54219 525 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
CUX1-205ENST00000425244 BCAR1P56945 870 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 FAAP100Q0VG06 881 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 CCDC14Q49A88 953 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 PPP1R26Q5T8A7 1209 aaPredicted RBP11.07□□□□□ -0.64
CUX1-205ENST00000425244 WLSQ5T9L3 541 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 PMF1Q6P1K2 205 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 CYP4V2Q6ZWL3 525 aaPredicted RBP11.07□□□□□ -0.64
CUX1-205ENST00000425244 ASRGL1Q7L266 308 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 SERINC5Q86VE9 423 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 FAM172AQ8WUF8 416 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 TTC17Q96AE7 1141 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 LPIN3Q9BQK8 851 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 RNF39Q9H2S5 420 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 A0A0G2JND7 137 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 PPEF2O14830 753 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 FAM155BO75949 473 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 APRTP07741 180 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 CCNB1P14635 433 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 RBL1P28749 1068 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 HOXC8P31273 242 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 STIP1P31948 543 aaKnown RBP11.07□□□□□ -0.64
CUX1-205ENST00000425244 YARSP54577 528 aaKnown RBP11.07□□□□□ -0.64
CUX1-205ENST00000425244 CCDC15Q0P6D6 951 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 RIPK1Q13546 671 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 ACAP1Q15027 740 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 CA9Q16790 459 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 LCLAT1Q6UWP7 414 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 RGS9BPQ6ZS82 235 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 SESTD1Q86VW0 696 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 MAP7D3Q8IWC1 876 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 PLD5Q8N7P1 536 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 PPM1NQ8N819 430 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 RNF157Q96PX1 679 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 MRPL45Q9BRJ2 306 aaKnown RBP11.07□□□□□ -0.64
CUX1-205ENST00000425244 DHRS4Q9BTZ2 278 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 B3GNT5Q9BYG0 378 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 ITGA11Q9UKX5 1188 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 ST3GAL5Q9UNP4 418 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 CITO14578 2027 aa11.07□□□□□ -0.64
CUX1-205ENST00000425244 F5H423 210 aaPredicted RBP11.06□□□□□ -0.64
CUX1-205ENST00000425244 APOL1O14791 398 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 DCTN3O75935 186 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 PFKMP08237 780 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 PYGBP11216 843 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 CST5P28325 142 aaPredicted RBP11.06□□□□□ -0.64
CUX1-205ENST00000425244 CD52P31358 61 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 SDC4P31431 198 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 RASA2Q15283 850 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 NLRP9Q7RTR0 991 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 NME8Q8N427 588 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 BANPQ8N9N5 519 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 CCDC110Q8TBZ0 833 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 C10orf82Q8WW14 230 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 SERAC1Q96JX3 654 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 FAM111AQ96PZ2 611 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
CUX1-205ENST00000425244 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 KIAA0100Q14667 2235 aaKnown RBP11.06□□□□□ -0.64
CUX1-205ENST00000425244 ANK1P16157 1881 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 IQANK1A0A1B0GTG1 560 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 MEIS3P2A8K0S8 358 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 HCRTO43612 131 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 RECQL4O94761 1208 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 INCA1Q0VD86 236 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 KCNJ11Q14654 390 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 TAF1BQ53T94 588 aaPredicted RBP11.06□□□□□ -0.64
CUX1-205ENST00000425244 PRPF39Q86UA1 669 aaKnown RBP11.06□□□□□ -0.64
CUX1-205ENST00000425244 MTDHQ86UE4 582 aaKnown RBP11.06□□□□□ -0.64
CUX1-205ENST00000425244 MZB1Q8WU39 189 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 PTPRN2Q92932 1015 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 TACO1Q9BSH4 297 aaKnown RBP11.06□□□□□ -0.64
CUX1-205ENST00000425244 MANSC1Q9H8J5 431 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 WBP1LQ9NX94 342 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 PCDH10Q9P2E7 1040 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 MCM8Q9UJA3 840 aa11.06□□□□□ -0.64
CUX1-205ENST00000425244 TROVE2P10155 538 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■■□□□ 11.8
CUX1-205ENST00000425244 TFE3P19532 575 aaPredicted RBP11.05□□□□□ -0.64
CUX1-205ENST00000425244 C1QTNF8P60827 252 aa11.05□□□□□ -0.64
CUX1-205ENST00000425244 ZNF618Q5T7W0 954 aa11.05□□□□□ -0.64
CUX1-205ENST00000425244 TTC30AQ86WT1 665 aa11.05□□□□□ -0.64
CUX1-205ENST00000425244 LRRC6Q86X45 466 aa11.05□□□□□ -0.64
CUX1-205ENST00000425244 AGGF1Q8N302 714 aaeCLIP11.05□□□□□ -0.642e-7■■■■■ 57.8
CUX1-205ENST00000425244 PQLC3Q8N755 202 aa11.05□□□□□ -0.64
CUX1-205ENST00000425244 ARRDC4Q8NCT1 418 aa11.05□□□□□ -0.64
CUX1-205ENST00000425244 OR6B3Q8NGW1 331 aa11.05□□□□□ -0.64
CUX1-205ENST00000425244 RFWD2Q8NHY2 731 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms