RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FZD8Q9H461 694 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PIDD1Q9HB75 910 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 SMYD2Q9NRG4 433 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 DCDC2Q9UHG0 476 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 PCSK1NQ9UHG2 260 aa15.76■□□□□ 0.11
C9orf3-204ENST00000424143 SMIM31A0A1B0GVY4 71 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 HMX2A2RU54 273 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 DCAF8L1A6NGE4 600 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 KCNN4O15554 427 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 GSRP00390 522 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 SERPINE1P05121 402 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 TGFB3P10600 412 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 BCAR1P56945 870 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 ZNF280AP59817 542 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-204ENST00000424143 TFAMQ00059 246 aaKnown RBP15.75■□□□□ 0.11
C9orf3-204ENST00000424143 SEMA5AQ13591 1074 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 ITGA9Q13797 1035 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 KYAT1Q16773 422 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 LIN52Q52LA3 116 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 ZNF394Q53GI3 561 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 TEDDM1Q5T9Z0 273 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 SCARA3Q6AZY7 606 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 NDUFAF2Q8N183 169 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 PQLC3Q8N755 202 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 EMC1Q8N766 993 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 TCHPQ9BT92 498 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 NAT9Q9BTE0 207 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 SPATA16Q9BXB7 569 aa15.75■□□□□ 0.11
C9orf3-204ENST00000424143 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.75■□□□□ 0.11
C9orf3-204ENST00000424143 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
C9orf3-204ENST00000424143 APOBEC2Q9Y235 224 aaKnown RBP15.75■□□□□ 0.11
C9orf3-204ENST00000424143 C2orf71A6NGG8 1288 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 PRR5-ARHGAP8B1AHC4 643 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 PIAS1O75925 651 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 UQCRBP14927 111 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 SNX16P57768 344 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 ARHGAP8P85298 464 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 POU5F1BQ06416 359 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 INCA1Q0VD86 236 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 TAF5Q15542 800 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 METTL21CQ5VZV1 264 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 LCLAT1Q6UWP7 414 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 NPNTQ6UXI9 565 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 HACE1Q8IYU2 909 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 ADGRF2Q8IZF7 708 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 ZNF280CQ8ND82 737 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 OR6Y1Q8NGX8 325 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 FBXO27Q8NI29 283 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 RXFP2Q8WXD0 754 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 CMTM5Q96DZ9 223 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 GORASP1Q9BQQ3 440 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 NFKBIZQ9BYH8 718 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 GBA2Q9HCG7 927 aaPredicted RBP15.74■□□□□ 0.11
C9orf3-204ENST00000424143 PCDH18Q9HCL0 1135 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 EIF2B3Q9NR50 452 aaKnown RBP15.74■□□□□ 0.11
C9orf3-204ENST00000424143 TJP2Q9UDY2 1190 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 TNFSF13BQ9Y275 285 aa15.74■□□□□ 0.11
C9orf3-204ENST00000424143 ITGBL1O95965 494 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-204ENST00000424143 CSH1P0DML2 217 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 CSH2P0DML3 217 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 DESP17661 470 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 SCNN1AP37088 669 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 FDFT1P37268 417 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 HARS2P49590 506 aaKnown RBP15.73■□□□□ 0.11
C9orf3-204ENST00000424143 STAT5BP51692 787 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 RPS6KA3P51812 740 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 COPAP53621 1224 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 LAMTOR4Q0VGL1 99 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 MMRN1Q13201 1228 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 FRG1Q14331 258 aaKnown RBP15.73■□□□□ 0.11
C9orf3-204ENST00000424143 KRT81Q14533 505 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 TMEM132BQ14DG7 1078 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 FAM102AQ5T9C2 384 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-204ENST00000424143 DCAF15Q66K64 600 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 ZNF534Q76KX8 674 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 ALDH16A1Q8IZ83 802 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 NME8Q8N427 588 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 ATP2A3Q93084 1043 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 ISL2Q96A47 359 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 RILPQ96NA2 401 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 MECRQ9BV79 373 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 PPP1R12CQ9BZL4 782 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 KLHL4Q9C0H6 718 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 ELOVL4Q9GZR5 314 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 MYOZ2Q9NPC6 264 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 PPP1R1BQ9UD71 204 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-204ENST00000424143 SIX4Q9UIU6 781 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 PPM1HQ9ULR3 514 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-204ENST00000424143 COL4A5P29400 1685 aa15.73■□□□□ 0.11
C9orf3-204ENST00000424143 EIF4E1BA6NMX2 242 aaKnown RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 TTLL13PA6NNM8 815 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 HACD1B0YJ81 288 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 PLIN3O60664 434 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 AVILO75366 819 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 LGR5O75473 907 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 FARP2O94887 1054 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 FGF3P11487 239 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-204ENST00000424143 PDGFRAP16234 1089 aa15.72■□□□□ 0.11
C9orf3-204ENST00000424143 EDNRBP24530 442 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms