RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 APODP05090 189 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 CHKAP35790 457 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 HARS2P49590 506 aaKnown RBP11.44□□□□□ -0.58
USP49-204ENST00000423567 TPM4P67936 248 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 UBXN1Q04323 297 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 FMNL3Q8IVF7 1028 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 FAM71AQ8IYT1 594 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 IPO4Q8TEX9 1081 aaKnown RBP11.44□□□□□ -0.58
USP49-204ENST00000423567 NKD2Q969F2 451 aaPredicted RBP11.44□□□□□ -0.58
USP49-204ENST00000423567 WBP2Q969T9 261 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 ACDQ96AP0 544 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 SPAG5Q96R06 1193 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 BPIFA3Q9BQP9 254 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 BBS2Q9BXC9 721 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 STK33Q9BYT3 514 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 SEMA4AQ9H3S1 761 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 SYNCQ9H7C4 482 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 ARHGEF4Q9NR80 690 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 ZSCAN32Q9NX65 697 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 DEC1Q9P2X7 70 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 AJAP1Q9UKB5 411 aaPredicted RBP11.44□□□□□ -0.58
USP49-204ENST00000423567 PCDHGC3Q9UN70 934 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 SLC8A2Q9UPR5 921 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 HBS1LQ9Y450 684 aaKnown RBP11.44□□□□□ -0.58
USP49-204ENST00000423567 MIA3Q5JRA6 1907 aa11.44□□□□□ -0.58
USP49-204ENST00000423567 KIF26AQ9ULI4 1882 aaPredicted RBP11.44□□□□□ -0.58
USP49-204ENST00000423567 MYO16Q9Y6X6 1858 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 LGALS16A8MUM7 142 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 E5RJQ4 531 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 NEDD8-MDP1E9PL57 170 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 CAPN9O14815 690 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 HOXC11O43248 304 aaPredicted RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 GREM1O60565 184 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 KAT7O95251 611 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 CYBBP04839 570 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 NCAM1P13591 858 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 CORO1AP31146 461 aaKnown RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 CLCN1P35523 988 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 OPRD1P41143 372 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 GRIA2P42262 883 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 SLC6A11P48066 632 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 RPL34P49207 117 aaKnown RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 ZNF165P49910 485 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 SATB1Q01826 763 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 PDCLQ13371 301 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 GAS6Q14393 721 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 NCAPHQ15003 741 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 SKOR2Q2VWA4 1001 aaPredicted RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 FILIP1LQ4L180 1135 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 NAIF1Q69YI7 327 aaPredicted RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 GRAMD4Q6IC98 578 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 TSSK4Q6SA08 328 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 Q6ZNB5 142 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 TPGS1Q6ZTW0 290 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 BHLHA9Q7RTU4 235 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 SLC47A2Q86VL8 602 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 TMEM25Q86YD3 366 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 DENND1CQ8IV53 801 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 PASD1Q8IV76 773 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 SCUBE3Q8IX30 993 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 MAML2Q8IZL2 1156 aaPredicted RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 NAT16Q8N8M0 369 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 NEK11Q8NG66 645 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 CLEC4CQ8WTT0 213 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 PPP1R13BQ96KQ4 1090 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 SLC4A5Q9BY07 1137 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 LHX5Q9H2C1 402 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 FBRSL1Q9HCM7 1045 aaKnown RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 FAM207AQ9NSI2 230 aaPredicted RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 MARK1Q9P0L2 795 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 SFMBT1Q9UHJ3 866 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 PCDHGA2Q9Y5H1 932 aa11.43□□□□□ -0.58
USP49-204ENST00000423567 HELZP42694 1942 aaKnown RBP11.43□□□□□ -0.58
USP49-204ENST00000423567 SYCE3A1L190 88 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 TBC1D3BA6NDS4 549 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 LRRC10BA6NIK2 292 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 CHURC1-FNTBB4DL54 471 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 PROB1E7EW31 1015 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 F8VZ95 297 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 TULP3O75386 442 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 PAPSS2O95340 614 aaPredicted RBP11.42□□□□□ -0.58
USP49-204ENST00000423567 PNMA6AP0CW24 399 aaPredicted RBP11.42□□□□□ -0.58
USP49-204ENST00000423567 TYRP14679 529 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 CYP11B1P15538 503 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 ZNF18P17022 549 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 MRE11P49959 708 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 SEC13P55735 322 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 ZNF445P59923 1031 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 POLR2FP61218 127 aaKnown RBP11.42□□□□□ -0.58
USP49-204ENST00000423567 KDSRQ06136 332 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 SYCP1Q15431 976 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 NUGGCQ68CJ6 796 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 DPY19L2P1Q6NXN4 242 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 MSANTD2Q6P1R3 559 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 TMEM110Q86TL2 294 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 ALYREFQ86V81 257 aaKnown RBP11.42□□□□□ -0.58
USP49-204ENST00000423567 UNC45BQ8IWX7 931 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 TMEM35BQ8NCS4 154 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 MSANTD4Q8NCY6 345 aa11.42□□□□□ -0.58
USP49-204ENST00000423567 C1orf131Q8NDD1 294 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms