RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 TDGF1P13385 188 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 GALK1P51570 392 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 GAD2Q05329 585 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 PDCLQ13371 301 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 GAS6Q14393 721 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 LY6G5CQ5SRR4 150 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 APTXQ7Z2E3 356 aaKnown RBP22.36■■□□□ 1.17
CPNE1-211ENST00000420363 CCDC26Q8TAB7 109 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 RNF139Q8WU17 664 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 NDRG1Q92597 394 aaKnown RBP22.36■■□□□ 1.17
CPNE1-211ENST00000420363 GOLGA1Q92805 767 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 TRIM62Q9BVG3 475 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 STK33Q9BYT3 514 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 ST7Q9NRC1 585 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 MARK1Q9P0L2 795 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 USP18Q9UMW8 372 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 SIK3Q9Y2K2 1263 aa22.36■■□□□ 1.17
CPNE1-211ENST00000420363 HBS1LQ9Y450 684 aaKnown RBP22.36■■□□□ 1.17
CPNE1-211ENST00000420363 SMTNL1A8MU46 457 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 PRR5-ARHGAP8B1AHC4 643 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-211ENST00000420363 LTFP02788 710 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 CDK11BP21127 795 aaKnown RBP22.35■■□□□ 1.17
CPNE1-211ENST00000420363 ARHGAP8P85298 464 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 NAIF1Q69YI7 327 aaPredicted RBP22.35■■□□□ 1.17
CPNE1-211ENST00000420363 Q6ZS52 159 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 BEND5Q7L4P6 421 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 TMEM110Q86TL2 294 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 SLC47A2Q86VL8 602 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 DHX40Q8IX18 779 aaKnown RBP22.35■■□□□ 1.17
CPNE1-211ENST00000420363 NOX5Q96PH1 765 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 CYTH4Q9UIA0 394 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 DNAH14Q0VDD8 3507 aa22.35■■□□□ 1.17
CPNE1-211ENST00000420363 MYOFQ9NZM1 2061 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 EGFP01133 1207 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 PNMA6AP0CW24 399 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-211ENST00000420363 ZNF165P49910 485 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 SATB1Q01826 763 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 LMNB2Q03252 620 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 LPAL2Q16609 132 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 FMNL3Q8IVF7 1028 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 ETFBKMTQ8IXQ9 262 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 ERGIC2Q96RQ1 377 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 FBRSL1Q9HCM7 1045 aaKnown RBP22.34■■□□□ 1.17
CPNE1-211ENST00000420363 CEP83Q9Y592 693 aa22.34■■□□□ 1.17
CPNE1-211ENST00000420363 CHURC1-FNTBB4DL54 471 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 E5RJQ4 531 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 PIK3R2O00459 728 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 ATG13O75143 517 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 CYP11B1P15538 503 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 KRT9P35527 623 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 TRIP4Q15650 581 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-211ENST00000420363 SKOR2Q2VWA4 1001 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-211ENST00000420363 PREPLQ4J6C6 727 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-211ENST00000420363 PRR23BQ6ZRT6 265 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 CLEC4CQ8WTT0 213 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 EDEM1Q92611 657 aa22.33■■□□□ 1.17
CPNE1-211ENST00000420363 CDV3Q9UKY7 258 aaKnown RBP22.33■■□□□ 1.17
CPNE1-211ENST00000420363 SLC12A8A0AV02 714 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 SYCE3A1L190 88 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 PAPSS1O43252 624 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-211ENST00000420363 LATS1O95835 1130 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 KLKB1P03952 638 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 ATP1A3P13637 1013 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 CORO1AP31146 461 aaKnown RBP22.32■■□□□ 1.16
CPNE1-211ENST00000420363 JAM2P57087 298 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 UBXN1Q04323 297 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 NNTQ13423 1086 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 SYCP1Q15431 976 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 LAIR1Q6GTX8 287 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 C12orf40Q86WS4 652 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 EZH1Q92800 747 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-211ENST00000420363 PNKPQ96T60 521 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 MIS12Q9H081 205 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 FAM207AQ9NSI2 230 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-211ENST00000420363 WDR35Q9P2L0 1181 aa22.32■■□□□ 1.16
CPNE1-211ENST00000420363 CACNG3O60359 315 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 RNF40O75150 1001 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 CAVIN2O95810 425 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 CDH5P33151 784 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-211ENST00000420363 CNR2P34972 360 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 CHKAP35790 457 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 KLK7P49862 253 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 ATXN1P54253 815 aaKnown RBP22.31■■□□□ 1.16
CPNE1-211ENST00000420363 SNX16P57768 344 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 SIM2Q14190 667 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-211ENST00000420363 ZNF677Q86XU0 584 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 TMEM25Q86YD3 366 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 PASD1Q8IV76 773 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 SCUBE3Q8IX30 993 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 FAM217AQ8IXS0 508 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 CPXM2Q8N436 756 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 WDTC1Q8N5D0 677 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 C1orf131Q8NDD1 294 aaKnown RBP22.31■■□□□ 1.16
CPNE1-211ENST00000420363 PPP1R13BQ96KQ4 1090 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 CPXM1Q96SM3 734 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 ASNSD1Q9NWL6 643 aa22.31■■□□□ 1.16
CPNE1-211ENST00000420363 A0A0A0MRY4 1105 aa22.3■■□□□ 1.16
CPNE1-211ENST00000420363 LSM8O95777 96 aaKnown RBP22.3■■□□□ 1.16
CPNE1-211ENST00000420363 IGLV3-27P01718 113 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms