RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 GRASPQ7Z6J2 395 aaPredicted RBP7.43□□□□□ -1.22
HMGN1-205ENST00000419378 USP37Q86T82 979 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 C12orf56Q8IXR9 622 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 TCEAL8Q8IYN2 117 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 LRRC52Q8N7C0 313 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 FAM181AQ8N9Y4 354 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 XXYLT1Q8NBI6 393 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 OR5B17Q8NGF7 314 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 CXorf38Q8TB03 319 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 CACTINQ8WUQ7 758 aaKnown RBP7.43□□□□□ -1.22
HMGN1-205ENST00000419378 EDAQ92838 391 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 BORCS6Q96GS4 357 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 PGLYRP2Q96PD5 576 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 MYADMQ96S97 322 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 OSBPL1AQ9BXW6 950 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 EPN3Q9H201 632 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 CYP4F11Q9HBI6 524 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 KIAA1586Q9HCI6 787 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 HCFC1R1Q9NWW0 138 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 CGNQ9P2M7 1197 aaKnown RBP7.43□□□□□ -1.22
HMGN1-205ENST00000419378 AFF4Q9UHB7 1163 aaKnown RBP7.43□□□□□ -1.22
HMGN1-205ENST00000419378 ITGA11Q9UKX5 1188 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 INSL5Q9Y5Q6 135 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 U3KQE9 123 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 DOCK6Q96HP0 2047 aa7.43□□□□□ -1.22
HMGN1-205ENST00000419378 GOLGA6L4A6NEF3 574 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 TMEM221A6NGB7 291 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 KPNA7A9QM74 516 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 M0R296 226 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 CYB561D2O14569 222 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 GSC2O15499 205 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 RHOBTB3O94955 611 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 VNN2O95498 520 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 TNNC2P02585 160 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 KRT19P08727 400 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 DLATP10515 647 aaKnown RBP7.42□□□□□ -1.22
HMGN1-205ENST00000419378 RBP5P82980 135 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 TNK2Q07912 1038 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 CYP24A1Q07973 514 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 BFSP1Q12934 665 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 GPR17Q13304 367 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 MYBPC2Q14324 1141 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 PSMD6Q15008 389 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 SURF1Q15526 300 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 PABPC1LQ4VXU2 614 aaKnown RBP7.42□□□□□ -1.22
HMGN1-205ENST00000419378 SDE2Q6IQ49 451 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 TMC3Q7Z5M5 1100 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 METTL23Q86XA0 190 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 WDR49Q8IV35 697 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 MFSD4AQ8N468 514 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 CSGALNACT2Q8N6G5 542 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF513Q8N8E2 541 aaPredicted RBP7.42□□□□□ -1.22
HMGN1-205ENST00000419378 ADCY4Q8NFM4 1077 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 OR10T2Q8NGX3 314 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 GOLGA5Q8TBA6 731 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 PPP1R14AQ96A00 147 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 CCDC47Q96A33 483 aaKnown RBP7.42□□□□□ -1.22
HMGN1-205ENST00000419378 CCDC127Q96BQ5 260 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF669Q96BR6 464 aaPredicted RBP7.42□□□□□ -1.22
HMGN1-205ENST00000419378 ANKRD36BP1Q96IX9 119 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 TMEM209Q96SK2 561 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 RTP3Q9BQQ7 232 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 LGR4Q9BXB1 951 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 KCTD10Q9H3F6 313 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 SMOC2Q9H3U7 446 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 LRRC4CQ9HCJ2 640 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 INTS13Q9NVM9 706 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 GFOD1Q9NXC2 390 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGN1-205ENST00000419378 WHRNQ9P202 907 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 EPS15L1Q9UBC2 864 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 DNMT3BQ9UBC3 853 aaKnown RBP7.42□□□□□ -1.22
HMGN1-205ENST00000419378 SIX4Q9UIU6 781 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 DSEQ9UL01 958 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 MAFFQ9ULX9 164 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 L1RE1Q9UN81 338 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 AGAP1Q9UPQ3 857 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 SORCS3Q9UPU3 1222 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 YIPF1Q9Y548 306 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 CAPN6Q9Y6Q1 641 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 NOTCH4Q99466 2003 aa7.42□□□□□ -1.22
HMGN1-205ENST00000419378 ZDBF2Q9HCK1 2354 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 MYO10Q9HD67 2058 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 MTMR11A4FU01 709 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 PDXKO00764 312 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 EXOC3O60645 756 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 PPM1BO75688 479 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 RHOP08100 348 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 LAMP2P13473 410 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 ITIH2P19823 946 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 OXCT1P55809 520 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF445P59923 1031 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 SIGLEC14Q08ET2 396 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 TWF1Q12792 350 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 PNOCQ13519 176 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 KCNB1Q14721 858 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 SLC5A9Q2M3M2 681 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 SLC39A12Q504Y0 691 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 WSCD1Q658N2 575 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 CENPPQ6IPU0 288 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms