RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 FAM71DQ8N9W8 422 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 OR10T2Q8NGX3 314 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 FAM149B1Q96BN6 582 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 PWWP2AQ96N64 755 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 WDR83Q9BRX9 315 aaKnown RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 TRIM62Q9BVG3 475 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 EPN3Q9H201 632 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 CENPHQ9H3R5 247 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 WDR6Q9NNW5 1121 aaKnown RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 DMAP1Q9NPF5 467 aaPredicted RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 STARD7Q9NQZ5 370 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 ARHGEF4Q9NR80 690 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 TMEM161AQ9NX61 479 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 CWC15Q9P013 229 aaKnown RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 KANSL3Q9P2N6 904 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 TIMM13Q9Y5L4 95 aaPredicted RBP9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 ACTL7BQ9Y614 415 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 RAD54BQ9Y620 910 aa9.4□□□□□ -0.9
LINCMD1-201ENST00000418518 CLUHO75153 1309 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 C5orf60A6NFR6 353 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 YJEFN3A6XGL0 299 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 KBTBD13C9JR72 458 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 E7ENQ6 273 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 H3BRJ5 948 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 H7C0C1 242 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 DNM1LO00429 736 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 PITPNM1O00562 1244 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 DGKIO75912 1065 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 OAZ2O95190 189 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 ZBED1O96006 694 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 IGLV3-25P01717 112 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 ITGB1P05556 798 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 TPSB2P20231 275 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 GCAP28676 217 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 ARL4AP40617 200 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 MAGEA3P43357 314 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 ATP5OP48047 213 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 CDR1P51861 262 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 TSPY1Q01534 308 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 GUCY1A3Q02108 690 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 RNASELQ05823 741 aaKnown RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 SLC10A2Q12908 348 aaPredicted RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 EIF4EBP2Q13542 120 aaPredicted RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 FASTKD3Q14CZ7 662 aaKnown RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 PAFAH1B3Q15102 231 aaKnown RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 PRKD1Q15139 912 aaPredicted RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 TPSAB1Q15661 275 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 LONRF1Q17RB8 773 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 DCAF6Q58WW2 860 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 NOMO2Q5JPE7 1267 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 EFHC2Q5JST6 749 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 SYPL2Q5VXT5 272 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 C1orf228Q6PIY5 440 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 BZW1Q7L1Q6 419 aaKnown RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 LRRC8DQ7L1W4 858 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 TAOK1Q7L7X3 1001 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM131BQ86XD5 332 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 FAM126BQ8IXS8 530 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 COLGALT2Q8IYK4 626 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 THEM5Q8N1Q8 247 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 ATP11CQ8NB49 1132 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 RNF169Q8NCN4 708 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 MCUQ8NE86 351 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 URGCPQ8TCY9 931 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 RNF139Q8WU17 664 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 NDRG1Q92597 394 aaKnown RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 C9orf72Q96LT7 481 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 CCDC77Q9BR77 488 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 PIGVQ9NUD9 493 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 TBC1D13Q9NVG8 400 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 TMLHEQ9NVH6 421 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 DNAJC17Q9NVM6 304 aaKnown RBP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 TMEM51Q9NW97 253 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 DTLQ9NZJ0 730 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 BCCIPQ9P287 314 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 SLC24A2Q9UI40 661 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 INPP5FQ9Y2H2 1132 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 CHD5Q8TDI0 1954 aa9.39□□□□□ -0.91
LINCMD1-201ENST00000418518 TCRBV7S3A2A0A539 114 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 TLDC2A0PJX2 215 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 ERICH4A6NGS2 130 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 I3L4J1 428 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 M0QYT0 321 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 SYN3O14994 580 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 DCLK1O15075 740 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 KCNN4O15554 427 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 TRAPPC3O43617 180 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 SPAG6O75602 509 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 DDHD2O94830 711 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 F9P00740 461 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 MYCNP04198 464 aaPredicted RBP9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 GOT1P17174 413 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 RBL1P28749 1068 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 ADRA1BP35368 520 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 CXCR3P49682 368 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 VEGFBP49765 207 aa9.38□□□□□ -0.91
LINCMD1-201ENST00000418518 GPX6P59796 221 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms