RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 HIRAP54198 1017 aaPredicted RBP13.63□□□□□ -0.23
BDNF-208ENST00000418212 CRADDP78560 199 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 SLC6A3Q01959 620 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 NPNTQ6UXI9 565 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 LINC00523Q86TU6 105 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 ZNF410Q86VK4 478 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 CARNMT1Q8N4J0 409 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 PRELID2Q8N945 189 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 USP6NLQ92738 828 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 MCM8Q9UJA3 840 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 CDY2AQ9Y6F7 541 aa13.63□□□□□ -0.23
BDNF-208ENST00000418212 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 URODP06132 367 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 PAEPP09466 180 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 PBX1P40424 430 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 TUBP50607 506 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 CCNHP51946 323 aaPredicted RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 MMRN1Q13201 1228 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 PTK6Q13882 451 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 CIPCQ9C0C6 399 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 EML4Q9HC35 981 aaKnown RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 NRCAMQ92823 1304 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 RAG1P15918 1043 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 BGNP21810 368 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 MAP4P27816 1152 aaKnown RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 SLC39A12Q504Y0 691 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 ABHD15Q6UXT9 468 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 TMEM139Q8IV31 216 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 NAT9Q9BTE0 207 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 NXF3Q9H4D5 531 aaKnown RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 VANGL2Q9ULK5 521 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 SHOC2Q9UQ13 582 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 RNF103O00237 685 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 SEC24DO94855 1032 aaPredicted RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 FBXO21O94952 628 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 GEMP55040 296 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 PKN2Q16513 984 aaKnown RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 MARC1Q5VT66 337 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 C4orf22Q6V702 233 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 HTR3CQ8WXA8 447 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 IGLV3-22A0A075B6J6 115 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 LTFP02788 710 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 SMIM10L2AP0DMW4 78 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 SMIM10L2BP0DMW5 78 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 TRIP10Q15642 601 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 CNGA2Q16280 664 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 HYIQ5T013 277 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 SYT17Q9BSW7 474 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 MRPL1Q9BYD6 325 aaKnown RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 TKTL2Q9H0I9 626 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 DMAP1Q9NPF5 467 aaPredicted RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 ETAA1Q9NY74 926 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 NINJ2Q9NZG7 142 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 BTBD7Q9P203 1132 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 AAR2Q9Y312 384 aaKnown RBP13.62□□□□□ -0.23
BDNF-208ENST00000418212 CDY1Q9Y6F8 540 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 SNCAIPQ9Y6H5 919 aa13.62□□□□□ -0.23
BDNF-208ENST00000418212 PFDN1O60925 122 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 KDELR1P24390 212 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 MGAT1P26572 445 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 NME5P56597 212 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 CSHL1Q14406 222 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 CYTH1Q15438 398 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 MRNIPQ6NTE8 343 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 DACT3Q96B18 629 aaPredicted RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 RUVBL2Q9Y230 463 aaKnown RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 MTO1Q9Y2Z2 717 aaKnown RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 CLDN5O00501 218 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 VAPBO95292 243 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 RGS4P49798 205 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 SLC35G1Q2M3R5 365 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 SYTL3Q4VX76 610 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 FUKQ8N0W3 1084 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 TCP10LQ8TDR4 215 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 TBCBQ99426 244 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 ILKAPQ9H0C8 392 aaPredicted RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 TMEM247A6NEH6 219 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 TTLL13PA6NNM8 815 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 ERI2A8K979 691 aaKnown RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 PTPN1P18031 435 aaKnown RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 OR1E1P30953 314 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 HNRNPH3P31942 346 aaKnown RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 CCL23P55773 120 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 NOMO3P69849 1222 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 ST13P4Q8IZP2 240 aaPredicted RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 ARHGAP18Q8N392 663 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 AENQ8WTP8 325 aaKnown RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 PCDHB18PQ96TA0 734 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 B3GNT5Q9BYG0 378 aa13.61□□□□□ -0.23
BDNF-208ENST00000418212 HMX1Q9NP08 348 aaPredicted RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 PNMA8BQ9ULN7 279 aaPredicted RBP13.61□□□□□ -0.23
BDNF-208ENST00000418212 A0A0B4J269 797 aa13.6□□□□□ -0.23
BDNF-208ENST00000418212 STMN1P16949 149 aa13.6□□□□□ -0.23
BDNF-208ENST00000418212 AQP5P55064 265 aa13.6□□□□□ -0.23
BDNF-208ENST00000418212 OXCT1P55809 520 aa13.6□□□□□ -0.23
BDNF-208ENST00000418212 TAS2R40P59535 323 aa13.6□□□□□ -0.23
BDNF-208ENST00000418212 BTG3Q14201 252 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms