RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CCDC134Q9H6E4 229 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 CYP4F12Q9HCS2 524 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 LGALS13Q9UHV8 139 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 SPDYE16A6NNV3 312 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 PHGDHO43175 533 aaKnown RBP13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 TRUB2O95900 331 aaKnown RBP13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 IQCF3P0C7M6 154 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 CYP2F1P24903 491 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 RPS27LQ71UM5 84 aaKnown RBP13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 BANPQ8N9N5 519 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 PHC3Q8NDX5 983 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 ZNF669Q96BR6 464 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 ACO2Q99798 780 aaKnown RBP13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 HOXC10Q9NYD6 342 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 PIM2Q9P1W9 311 aa13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 XIRP1Q702N8 1843 aaKnown RBP13.65□□□□□ -0.22
TNFRSF8-203ENST00000417814 ADM5C9JUS6 153 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 C9JVG2 144 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 TPP1O14773 563 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 SMNDC1O75940 238 aaKnown RBP eCLIP13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 ATP5HO75947 161 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 PYGLP06737 847 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 CD1EP15812 388 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 FGFR3P22607 806 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 SEPT6Q14141 434 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 HSP90AA5PQ58FG0 334 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 SLC45A4Q5BKX6 768 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 UNC5AQ6ZN44 842 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 WDR75Q8IWA0 830 aaKnown RBP13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 EDEM1Q92611 657 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 MRPL45Q9BRJ2 306 aaKnown RBP13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 DDX18Q9NVP1 670 aaKnown RBP13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 CLIC5Q9NZA1 410 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 STRIP2Q9ULQ0 834 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 SNCAIPQ9Y6H5 919 aa13.65□□□□□ -0.23
TNFRSF8-203ENST00000417814 ATRNL1Q5VV63 1379 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 C2CD2LO14523 706 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 TPST1O60507 370 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 ACAP1Q15027 740 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 HABP4Q5JVS0 413 aaKnown RBP13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 CDCA2Q69YH5 1023 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 CATSPER4Q7RTX7 472 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 NAT8LQ8N9F0 302 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 TTC13Q8NBP0 860 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 SLC35B2Q8TB61 432 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 SH3TC2Q8TF17 1288 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 HASPINQ8TF76 798 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 APOPT1Q96IL0 206 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 NTPCRQ9BSD7 190 aaKnown RBP13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 SLC24A2Q9UI40 661 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 SLC39A10Q9ULF5 831 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 V9GYQ6 96 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 COL22A1Q8NFW1 1626 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 DESP17661 470 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 MUTP22033 750 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 FOXD4Q12950 439 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 RIPK1Q13546 671 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 TFDP2Q14188 446 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 TMEM132DQ14C87 1099 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 FBXO48Q5FWF7 155 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 EFHC2Q5JST6 749 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 TTC39BQ5VTQ0 682 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 SLC4A11Q8NBS3 891 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 PCYT2Q99447 389 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 SENP1Q9P0U3 644 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 CSADQ9Y600 493 aa13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 MYH9P35579 1960 aaKnown RBP13.64□□□□□ -0.23
TNFRSF8-203ENST00000417814 SIGLEC16A6NMB1 481 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 MOCS2O96007 188 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ITGAVP06756 1048 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 SLC34A1Q06495 639 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 HIC1Q14526 733 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 BBS12Q6ZW61 710 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 C10orf107Q8IVU9 208 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 KBTBD2Q8IY47 623 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 PLD5Q8N7P1 536 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 RSAD1Q9HA92 442 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 XAB2Q9HCS7 855 aaKnown RBP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 CDK5RAP2Q96SN8 1893 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 APOC4-APOC2K7ER74 178 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 SEC24DO94855 1032 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 APOC2P02655 101 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ARSAP15289 507 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ASPAP45381 313 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 RAB27AP51159 221 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ITKQ08881 620 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ZNF460Q14592 562 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ATG16L1Q676U5 607 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 CEP128Q6ZU80 1094 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 ARHGAP24Q8N264 748 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 PAF1Q8N7H5 531 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 STKLD1Q8NE28 680 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 PCDH19Q8TAB3 1148 aa13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 LENG1Q96BZ8 264 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF8-203ENST00000417814 DNAJC1Q96KC8 554 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms