RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 AGO1Q9UL18 857 aaKnown RBP16.35■□□□□ 0.21
ITGB1-204ENST00000417122 FAM186AA6NE01 2351 aa16.35■□□□□ 0.21
ITGB1-204ENST00000417122 GOLGA6L22H0YM25 854 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 FBXO21O94952 628 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 CHRM1P11229 460 aaPredicted RBP16.34■□□□□ 0.21
ITGB1-204ENST00000417122 PRKCSHP14314 528 aaPredicted RBP16.34■□□□□ 0.21
ITGB1-204ENST00000417122 GNA15P30679 374 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 GPD2P43304 727 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 DGKEP52429 567 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 CRY1Q16526 586 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 HSP90AA4PQ58FG1 418 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 EOGTQ5NDL2 527 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 C10orf76Q5T2E6 689 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 TMEM92Q6UXU6 159 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 FAM160A2Q8N612 972 aaPredicted RBP16.34■□□□□ 0.21
ITGB1-204ENST00000417122 GPR161Q8N6U8 529 aaKnown RBP16.34■□□□□ 0.21
ITGB1-204ENST00000417122 KCNV2Q8TDN2 545 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 CLEC4CQ8WTT0 213 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 ZNF606Q8WXB4 792 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 BHMTQ93088 406 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 TUBGCP2Q9BSJ2 902 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 NDST4Q9H3R1 872 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 ZDHHC4Q9NPG8 344 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 ST7Q9NRC1 585 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 PLK2Q9NYY3 685 aa16.34■□□□□ 0.21
ITGB1-204ENST00000417122 HBS1LQ9Y450 684 aaKnown RBP16.34■□□□□ 0.21
ITGB1-204ENST00000417122 BECN2A8MW95 431 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 SGK1O00141 431 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 THAP12O43422 761 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 LTFP02788 710 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 RETP07949 1114 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 USP8P40818 1118 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 RPL34P49207 117 aaKnown RBP16.33■□□□□ 0.2
ITGB1-204ENST00000417122 DGKGP49619 791 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 TRIP4Q15650 581 aaPredicted RBP16.33■□□□□ 0.2
ITGB1-204ENST00000417122 MEA1Q16626 185 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 VWA3BQ502W6 1294 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 DENND1BQ6P3S1 775 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 CACNA2D4Q7Z3S7 1137 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 CPXM2Q8N436 756 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 ZNF513Q8N8E2 541 aaPredicted RBP16.33■□□□□ 0.2
ITGB1-204ENST00000417122 GOLGA1Q92805 767 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 MIS12Q9H081 205 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 SIX2Q9NPC8 291 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 ACP6Q9NPH0 428 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 SAMSN1Q9NSI8 373 aaKnown RBP16.33■□□□□ 0.2
ITGB1-204ENST00000417122 STARD13Q9Y3M8 1113 aa16.33■□□□□ 0.2
ITGB1-204ENST00000417122 PTPRZ1P23471 2315 aaPredicted RBP16.33■□□□□ 0.2
ITGB1-204ENST00000417122 KCNJ18B7U540 433 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 ADAM23O75077 832 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 PENKP01210 267 aaPredicted RBP16.32■□□□□ 0.2
ITGB1-204ENST00000417122 CISD3P0C7P0 127 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 ACADSBP45954 432 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 HARS2P49590 506 aaKnown RBP16.32■□□□□ 0.2
ITGB1-204ENST00000417122 SPEM2Q0P670 501 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 KCNJ12Q14500 433 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 MIIPQ5JXC2 388 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 FYB2Q5VWT5 728 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 ANO7Q6IWH7 933 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 MSANTD2Q6P1R3 559 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 RBM43Q6ZSC3 357 aaKnown RBP16.32■□□□□ 0.2
ITGB1-204ENST00000417122 TOGARAM2Q6ZUX3 1019 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 TRMT11Q7Z4G4 463 aaKnown RBP16.32■□□□□ 0.2
ITGB1-204ENST00000417122 KBTBD6Q86V97 674 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 RASSF3Q86WH2 238 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 SHC3Q92529 594 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 P2RY11Q96G91 374 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 TPSD1Q9BZJ3 242 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 POLMQ9NP87 494 aaPredicted RBP16.32■□□□□ 0.2
ITGB1-204ENST00000417122 FBXO10Q9UK96 956 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 DNAJC12Q9UKB3 198 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 USP18Q9UMW8 372 aa16.32■□□□□ 0.2
ITGB1-204ENST00000417122 RIF1Q5UIP0 2472 aaKnown RBP16.31■□□□□ 0.2
ITGB1-204ENST00000417122 OTOGLQ3ZCN5 2332 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 PRRT4C9JH25 899 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 PES1O00541 588 aaKnown RBP16.31■□□□□ 0.2
ITGB1-204ENST00000417122 MSI1O43347 362 aaKnown RBP16.31■□□□□ 0.2
ITGB1-204ENST00000417122 ALDH1A2O94788 518 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 CYBBP04839 570 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 HNRNPLP14866 589 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■■□□□ 13.6
ITGB1-204ENST00000417122 TGM1P22735 817 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 ID4P47928 161 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 SMYD5Q6GMV2 418 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 FAM217AQ8IXS0 508 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 MDGA1Q8NFP4 955 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 STK32AQ8WU08 396 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 SLC4A5Q9BY07 1137 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 PARD6AQ9NPB6 346 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
ITGB1-204ENST00000417122 HCN2Q9UL51 889 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 NFE2L3Q9Y4A8 694 aa16.31■□□□□ 0.2
ITGB1-204ENST00000417122 MYO18AQ92614 2054 aaKnown RBP16.31■□□□□ 0.2
ITGB1-204ENST00000417122 RALGAPA1Q6GYQ0 2036 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 SART1O43290 800 aaKnown RBP16.3■□□□□ 0.2
ITGB1-204ENST00000417122 LRP3O75074 770 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 LATS1O95835 1130 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 NCAM1P13591 858 aa16.3■□□□□ 0.2
ITGB1-204ENST00000417122 EEF1GP26641 437 aaKnown RBP16.3■□□□□ 0.2
ITGB1-204ENST00000417122 KCNMA1Q12791 1236 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms