RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 TSPY26PQ9H489 355 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 FAM124BQ9H5Z6 455 aaPredicted RBP17.58■□□□□ 0.4
SF1-207ENST00000413951 MMRN2Q9H8L6 949 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 ZNF510Q9Y2H8 683 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 ATG2BQ96BY7 2078 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 SPTBN2O15020 2390 aa17.58■□□□□ 0.4
SF1-207ENST00000413951 TCRBV21S2A2A0A5A6 115 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 SCAMP3O14828 347 aaKnown RBP17.57■□□□□ 0.4
SF1-207ENST00000413951 ZNF217O75362 1048 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 NTSR1P30989 418 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 ASPAP45381 313 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 PLA2G4AP47712 749 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 NOVA1P51513 510 aaKnown RBP17.57■□□□□ 0.4
SF1-207ENST00000413951 VWA3BQ502W6 1294 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 SYT12Q8IV01 421 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 PHTF2Q8N3S3 785 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 NAT16Q8N8M0 369 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 ZMIZ2Q8NF64 920 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 CEP76Q8TAP6 659 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 HMGB4Q8WW32 186 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 NDST4Q9H3R1 872 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 APOBEC3GQ9HC16 384 aaKnown RBP17.57■□□□□ 0.4
SF1-207ENST00000413951 FAM49BQ9NUQ9 324 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 MARK1Q9P0L2 795 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 DNMT3LQ9UJW3 386 aa17.57■□□□□ 0.4
SF1-207ENST00000413951 IRF1P10914 325 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 RALAP11233 206 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 ATP1A3P13637 1013 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 CEACAM1P13688 526 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 CSRP1P21291 193 aaKnown RBP17.56■□□□□ 0.4
SF1-207ENST00000413951 ACO1P21399 889 aaKnown RBP17.56■□□□□ 0.4
SF1-207ENST00000413951 BCKDHBP21953 392 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 ADORA2BP29275 332 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 SLC8A3P57103 927 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 LYSMD4Q5XG99 296 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 PSAPL1Q6NUJ1 521 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 LUZP1Q86V48 1076 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 TMEM25Q86YD3 366 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 ZNF276Q8N554 614 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 C12orf29Q8N999 325 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 BBS2Q9BXC9 721 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 KLF16Q9BXK1 252 aaPredicted RBP17.56■□□□□ 0.4
SF1-207ENST00000413951 NIF3L1Q9GZT8 377 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 DNAJC17Q9NVM6 304 aaKnown RBP17.56■□□□□ 0.4
SF1-207ENST00000413951 SDK1Q7Z5N4 2213 aa17.56■□□□□ 0.4
SF1-207ENST00000413951 BECN2A8MW95 431 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 NEDD8-MDP1E9PL57 170 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 CACNG3O60359 315 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 ADAM23O75077 832 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 BEST1O76090 585 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 HOXB2P14652 356 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 CETN1Q12798 172 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 MAP7D1Q3KQU3 841 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 TRIM61Q5EBN2 209 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 EMC10Q5UCC4 262 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 SPOPLQ6IQ16 392 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 CLEC20AQ6ZU45 233 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 CHPFQ8IZ52 775 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 ARHGAP18Q8N392 663 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 SLC32A1Q9H598 525 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 KIAA1549LQ6ZVL6 1849 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 TPRP12270 2363 aaKnown RBP17.55■□□□□ 0.4
SF1-207ENST00000413951 ACACBO00763 2458 aa17.55■□□□□ 0.4
SF1-207ENST00000413951 EML5Q05BV3 1969 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 GFRA2O00451 464 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 NPC1O15118 1278 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 RARGP13631 454 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 TYRP14679 529 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 CHKAP35790 457 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 ZNF132P52740 706 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 COPB1P53618 953 aaKnown RBP17.54■□□□□ 0.4
SF1-207ENST00000413951 ATXN3P54252 364 aaPredicted RBP17.54■□□□□ 0.4
SF1-207ENST00000413951 COG7P83436 770 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 SLC23A3Q6PIS1 610 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 CCDC186Q7Z3E2 898 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 CREBRFQ8IUR6 639 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 TMEFF1Q8IYR6 380 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 EHBP1Q8NDI1 1231 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 RLN3Q8WXF3 142 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 DUSP16Q9BY84 665 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 UBXN6Q9BZV1 441 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 DCLK3Q9C098 648 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 TAB2Q9NYJ8 693 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 CLIC5Q9NZA1 410 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 NAGPAQ9UK23 515 aa17.54■□□□□ 0.4
SF1-207ENST00000413951 MYO16Q9Y6X6 1858 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 LGALS16A8MUM7 142 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 CILPO75339 1184 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 CHRM1P11229 460 aaPredicted RBP17.53■□□□□ 0.4
SF1-207ENST00000413951 HNRNPLP14866 589 aaKnown RBP eCLIP17.53■□□□□ 0.4
SF1-207ENST00000413951 DGKGP49619 791 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 KIF11P52732 1056 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 IRX4P78413 519 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 RPL6Q02878 288 aaKnown RBP17.53■□□□□ 0.4
SF1-207ENST00000413951 MESP2Q0VG99 397 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 ORC1Q13415 861 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 DUOXA1Q1HG43 343 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 C10orf120Q5SQS8 335 aa17.53■□□□□ 0.4
SF1-207ENST00000413951 SH3PXD2AQ5TCZ1 1133 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms