RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GDAQ9Y2T3 454 aa5.4□□□□□ -1.54
HERC4-205ENST00000412272 PCDHA13Q9Y5I0 950 aa5.4□□□□□ -1.54
HERC4-205ENST00000412272 ABCB11O95342 1321 aa5.4□□□□□ -1.54
HERC4-205ENST00000412272 USP31Q70CQ4 1352 aa5.4□□□□□ -1.54
HERC4-205ENST00000412272 SIPA1L3O60292 1781 aaPredicted RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 SSU72P8A0A1W2PR75 194 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 TRPC5OSA6NMA1 111 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 KCNJ18B7U540 433 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 F8W8V4 182 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 FOXN1O15353 648 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 RAD51CO43502 376 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 PTX3P26022 381 aaPredicted RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 MARK3P27448 753 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 SOX6P35712 828 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 IREB2P48200 963 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 PPARAQ07869 468 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 SCRN3Q0VDG4 424 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 COASYQ13057 564 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 KCNJ12Q14500 433 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 PDIA6Q15084 440 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 MTFR1Q15390 333 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 OASLQ15646 514 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 MCMDC2Q4G0Z9 681 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 ODR4Q5SWX8 454 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 NFRKBQ6P4R8 1299 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 UNC5AQ6ZN44 842 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 ECHDC2Q86YB7 292 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 HPS6Q86YV9 775 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 KIAA2013Q8IYS2 634 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 U2AF1L4Q8WU68 220 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 CKAP2Q8WWK9 683 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 MARVELD3Q96A59 401 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 TMEM80Q96HE8 168 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 PRMT1Q99873 361 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 TDRD1Q9BXT4 1180 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 MROQ9BYG7 248 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 CD209Q9NNX6 404 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 BRD7Q9NPI1 651 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 DNMT3BQ9UBC3 853 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 RSL24D1Q9UHA3 163 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 FBXO10Q9UK96 956 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 PADI4Q9UM07 663 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 ADAMTS7Q9UKP4 1686 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 MYL3P08590 195 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 HOXC12P31275 282 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 KRT2P35908 639 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 POLGP54098 1239 aaPredicted RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 NUP107P57740 925 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 HERC3Q15034 1050 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 VPS72Q15906 364 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 SMTNL2Q2TAL5 461 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 IQCCQ4KMZ1 466 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 ARSHQ5FYA8 562 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 PLEKHA7Q6IQ23 1121 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 CGB2Q6NT52 195 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 ARHGAP11AQ6P4F7 1023 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 C15orf52Q6ZUT6 534 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 USP51Q70EK9 711 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 RALYLQ86SE5 291 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 ZNF398Q8TD17 642 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 CPLX3Q8WVH0 158 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 RAD51AP1Q96B01 352 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 SUCLG2Q96I99 432 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 PPP1R36Q96LQ0 422 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 C7orf26Q96N11 449 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 MIPEPQ99797 713 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 TMEM79Q9BSE2 394 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 TUBB6Q9BUF5 446 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 GON7Q9BXV9 100 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 MRPS26Q9BYN8 205 aaKnown RBP5.4□□□□□ -1.55
HERC4-205ENST00000412272 KLC2Q9H0B6 622 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 SEC31BQ9NQW1 1179 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 SMYD2Q9NRG4 433 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 ACTR3BQ9P1U1 418 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 EPS15L1Q9UBC2 864 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 SERTAD1Q9UHV2 236 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 HAO1Q9UJM8 370 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 SNX7Q9UNH6 387 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 DLEC1Q9Y238 1755 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 KIF13AQ9H1H9 1805 aa5.4□□□□□ -1.55
HERC4-205ENST00000412272 MEN1O00255 615 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 RASGRF2O14827 1237 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 GATCO43716 136 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 CDH16O75309 829 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 LRRN2O75325 713 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ADRA2BP18089 450 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 HOXA7P31268 230 aaPredicted RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 RRM2P31350 389 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 TALDO1P37837 337 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 SLC18A1P54219 525 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 CAP1Q01518 475 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 RAD51Q06609 339 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 PLA2G4EQ3MJ16 856 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 CEP55Q53EZ4 464 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 LDHAL6AQ6ZMR3 332 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 CYB5R4Q7L1T6 521 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 EID3Q8N140 333 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 ASCC1Q8N9N2 400 aaKnown RBP5.39□□□□□ -1.55
HERC4-205ENST00000412272 TPCN2Q8NHX9 752 aa5.39□□□□□ -1.55
HERC4-205ENST00000412272 RFWD2Q8NHY2 731 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms