RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 CHMP2BQ9UQN3 213 aa25.46■■□□□ 1.67
VRK2-202ENST00000412104 POMCP01189 267 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 TSHRP16473 764 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 AMPD1P23109 780 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 ARL4AP40617 200 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 PKN2Q16513 984 aaKnown RBP25.45■■□□□ 1.67
VRK2-202ENST00000412104 SYPL2Q5VXT5 272 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 ZMIZ2Q8NF64 920 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 CCDC110Q8TBZ0 833 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 KLC2Q9H0B6 622 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 ACSS3Q9H6R3 686 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 TMEM30AQ9NV96 361 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 ETNK2Q9NVF9 386 aa25.45■■□□□ 1.67
VRK2-202ENST00000412104 RCOR3Q9P2K3 495 aaPredicted RBP25.45■■□□□ 1.67
VRK2-202ENST00000412104 SYNJ2BP-COX16A0A087WUM0 186 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 A0A0U1RQF3 1178 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 M0QYT0 321 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 NRP1O14786 923 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 KIAA0754O94854 1291 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 FBXO21O94952 628 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 ELK3P41970 407 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 CACNA2D1P54289 1103 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 FAXCQ5TGI0 409 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 GPRIN1Q7Z2K8 1008 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 FBF1Q8TES7 1133 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 MRRFQ96E11 262 aaKnown RBP25.45■■□□□ 1.66
VRK2-202ENST00000412104 QKIQ96PU8 341 aaKnown RBP eCLIP25.45■■□□□ 1.661e-7■■■■■ 31.4
VRK2-202ENST00000412104 KCNK16Q96T55 309 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 TRMT13Q9NUP7 481 aaKnown RBP25.45■■□□□ 1.66
VRK2-202ENST00000412104 COX16Q9P0S2 106 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 MFHAS1Q9Y4C4 1052 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 PTCH2Q9Y6C5 1203 aa25.45■■□□□ 1.66
VRK2-202ENST00000412104 TRIM66O15016 1216 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 TOMM70O94826 608 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 VIMP08670 466 aaKnown RBP25.44■■□□□ 1.66
VRK2-202ENST00000412104 ODC1P11926 461 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 DAOAP59103 153 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 KLHL38Q2WGJ6 581 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 KCNT2Q6UVM3 1135 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 YTHDF3Q7Z739 585 aaKnown RBP25.44■■□□□ 1.66
VRK2-202ENST00000412104 TAX1BP1Q86VP1 789 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 IGDCC3Q8IVU1 814 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 PCSK9Q8NBP7 692 aaKnown RBP25.44■■□□□ 1.66
VRK2-202ENST00000412104 ADAM2Q99965 735 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 TMPRSS4Q9NRS4 437 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 RNF186Q9NXI6 227 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 NKIRAS1Q9NYS0 192 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 DTLQ9NZJ0 730 aa25.44■■□□□ 1.66
VRK2-202ENST00000412104 I3L4J1 428 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 KRT15P19012 456 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 PCSK1P29120 753 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 MAGEA6P43360 314 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 IFT88Q13099 833 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 PTK7Q13308 1070 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 ARHGEF18Q6ZSZ5 1173 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 CCDC33Q8N5R6 958 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 GDAP1Q8TB36 358 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 RTP3Q9BQQ7 232 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 TRABDQ9H4I3 376 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 ARHGEF4Q9NR80 690 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 TEX264Q9Y6I9 313 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 ZNF638Q14966 1978 aaKnown RBP25.43■■□□□ 1.66
VRK2-202ENST00000412104 FYNP06241 537 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 ATP2A2P16615 1042 aaKnown RBP25.43■■□□□ 1.66
VRK2-202ENST00000412104 DEUP1Q05D60 604 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 NME3Q13232 169 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 TRIM71Q2Q1W2 868 aaKnown RBP25.43■■□□□ 1.66
VRK2-202ENST00000412104 PAN2Q504Q3 1202 aaKnown RBP25.43■■□□□ 1.66
VRK2-202ENST00000412104 RAB41Q5JT25 222 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 C4orf22Q6V702 233 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 CKAP2Q8WWK9 683 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 SMARCD1Q96GM5 515 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 CABS1Q96KC9 395 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 OLFM3Q96PB7 478 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 DHRS4Q9BTZ2 278 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 KIF9Q9HAQ2 790 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 ETNK1Q9HBU6 452 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 CNGB3Q9NQW8 809 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 PIGVQ9NUD9 493 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 SENP1Q9P0U3 644 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 NOD1Q9Y239 953 aa25.43■■□□□ 1.66
VRK2-202ENST00000412104 FAM47DPA6NHR8 397 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 YJEFN3A6XGL0 299 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 E7ENQ6 273 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 AVILO75366 819 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 GCATO75600 419 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 GRIK3Q13003 919 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 CBLBQ13191 982 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 ITGA7Q13683 1181 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 C10orf67Q8IYJ2 551 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 RNF139Q8WU17 664 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 PAFAH2Q99487 392 aa25.42■■□□□ 1.66
VRK2-202ENST00000412104 FRMD8Q9BZ67 464 aaPredicted RBP25.42■■□□□ 1.66
VRK2-202ENST00000412104 NSRP1Q9H0G5 558 aaKnown RBP25.42■■□□□ 1.66
VRK2-202ENST00000412104 KBTBD13C9JR72 458 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 B3GAT3O94766 335 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 BRCC3P46736 316 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 AGGF1Q8N302 714 aaeCLIP25.41■■□□□ 1.66
VRK2-202ENST00000412104 MYLPFQ96A32 169 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 PGBD4Q96DM1 585 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms