RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 SYCP3Q8IZU3 236 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 C1orf216Q8TAB5 229 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 NOC3LQ8WTT2 800 aaKnown RBP6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 SNX19Q92543 992 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 PRCCQ92733 491 aaPredicted RBP6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 IGSF8Q969P0 613 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 SIPA1Q96FS4 1042 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 ZSCAN31Q96LW9 406 aaPredicted RBP6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 NRSN2Q9GZP1 204 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 CCSER2Q9H7U1 834 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 MRPL44Q9H9J2 332 aaKnown RBP6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 PDE11AQ9HCR9 933 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 OSGEPQ9NPF4 335 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 INTS13Q9NVM9 706 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 COMMD8Q9NX08 183 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 CHORDC1Q9UHD1 332 aaPredicted RBP6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 PCDHGA1Q9Y5H4 931 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 LOC400499M0QZD8 3231 aa6.35□□□□□ -1.39
HMGN1P20-201ENST00000411849 PTPRJQ12913 1337 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 GOLGA8IPA6NC78 632 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 GOLGA8JA6NMD2 632 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 KCNJ18B7U540 433 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 WASH3PC4AMC7 463 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 ERVH48-1M5A8F1 160 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 PAPSS1O43252 624 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 TLR5O60602 858 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 PRPF6O94906 941 aaKnown RBP6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 GCNT3O95395 438 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 CACNA2D1P54289 1103 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 CDH8P55286 799 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 TNNC1P63316 161 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 ENPP2Q13822 863 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 DUOXA2Q1HG44 320 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 KIF19Q2TAC6 998 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 WDR49Q8IV35 697 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 GPD1LQ8N335 351 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 B3GALNT2Q8NCR0 500 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 OR6B3Q8NGW1 331 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 SNIP1Q8TAD8 396 aaKnown RBP6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 WBP1Q96G27 269 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 SMARCD1Q96GM5 515 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 FAM84AQ96KN4 292 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 STRA6Q9BX79 667 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 B3GNT5Q9BYG0 378 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 BACH2Q9BYV9 841 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 ZNF518BQ9C0D4 1074 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 MKRN2Q9H000 416 aaKnown RBP6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 IKZF4Q9H2S9 585 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 FBXO44Q9H4M3 255 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 CLMPQ9H6B4 373 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 DMAP1Q9NPF5 467 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 TLR8Q9NR97 1041 aaKnown RBP6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 TMEM30AQ9NV96 361 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 GMIPQ9P107 970 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 ANKRD6Q9Y2G4 727 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 SLC27A6Q9Y2P4 619 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 SNX11Q9Y5W9 270 aa6.34□□□□□ -1.39
HMGN1P20-201ENST00000411849 CFAP46Q8IYW2 2715 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 FAM92AA1XBS5 289 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ZNF233A6NK53 670 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 A8MXQ7 604 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 CLDN5O00501 218 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 TLX3O43711 291 aaPredicted RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 RFPL3O75679 317 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 BMP15O95972 392 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 CISD3P0C7P0 127 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ZDHHC11BP0C7U3 371 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ACO1P21399 889 aaKnown RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ACTN2P35609 894 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ATP5C1P36542 298 aaKnown RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 LONP1P36776 959 aaKnown RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 IL12RB1P42701 662 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 SLC5A3P53794 718 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 CXADRP78310 365 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 RHDQ02161 417 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ARID5AQ03989 594 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 KCNA1Q09470 495 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 RTP5Q14D33 572 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 EIF4HQ15056 248 aaKnown RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 WDR72Q3MJ13 1102 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 TAF1BQ53T94 588 aaPredicted RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 SCARA3Q6AZY7 606 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 DYMQ7RTS9 669 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ANKS1BQ7Z6G8 1248 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ADAT2Q7Z6V5 191 aaKnown RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 FAM124AQ86V42 546 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 ZSWIM2Q8NEG5 633 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 OR5B17Q8NGF7 314 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 SCAMP5Q8TAC9 235 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 FGF11Q92914 225 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 WBP2Q969T9 261 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 SKA1Q96BD8 255 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 TMEM176AQ96HP8 235 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 TNIP3Q96KP6 325 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 KCNK16Q96T55 309 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 MRPL45Q9BRJ2 306 aaKnown RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 CBWD1Q9BRT8 395 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 MED10Q9BTT4 135 aa6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 KLF16Q9BXK1 252 aaPredicted RBP6.33□□□□□ -1.4
HMGN1P20-201ENST00000411849 TRIM9Q9C026 710 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms