RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SESTD1Q86VW0 696 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 LINC01465Q8N7H1 131 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 SLC35F5Q8WV83 523 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 TRAPPC12Q8WVT3 735 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 NRG4Q8WWG1 115 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 CCDC106Q9BWC9 280 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 PRDM16Q9HAZ2 1276 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 PLA2G4CQ9UP65 541 aa17.27■□□□□ 0.36
LIMS2-208ENST00000410011 DNAJC25-GNG10A0A024R161 153 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 KRT36O76013 467 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 CSH1P0DML2 217 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 CSH2P0DML3 217 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 SCNN1AP37088 669 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 TRMT5Q32P41 509 aaKnown RBP17.27■□□□□ 0.35
LIMS2-208ENST00000410011 STEAP4Q687X5 459 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 ARID3BQ8IVW6 561 aaPredicted RBP17.27■□□□□ 0.35
LIMS2-208ENST00000410011 STKLD1Q8NE28 680 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 SCG3Q8WXD2 468 aaKnown RBP17.27■□□□□ 0.35
LIMS2-208ENST00000410011 CENPIQ92674 756 aaPredicted RBP17.27■□□□□ 0.35
LIMS2-208ENST00000410011 C11orf84Q9BUA3 381 aaPredicted RBP17.27■□□□□ 0.35
LIMS2-208ENST00000410011 DPP3Q9NY33 737 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 ERAP1Q9NZ08 941 aa17.27■□□□□ 0.35
LIMS2-208ENST00000410011 CCDC189A1A4V9 331 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 PEX10O60683 326 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 TM7SF2O76062 418 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 HDAC4P56524 1084 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 IRX1P78414 480 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-208ENST00000410011 SARNPP82979 210 aaKnown RBP17.26■□□□□ 0.35
LIMS2-208ENST00000410011 SYCP2LQ5T4T6 812 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 PMF1Q6P1K2 205 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 SCYL2Q6P3W7 929 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 TREML1Q86YW5 311 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 NDUFAF2Q8N183 169 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 PPFIBP2Q8ND30 876 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 ACAP3Q96P50 834 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 MECRQ9BV79 373 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 SLC13A1Q9BZW2 595 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 NGRNQ9NPE2 291 aaKnown RBP17.26■□□□□ 0.35
LIMS2-208ENST00000410011 HBS1LQ9Y450 684 aaKnown RBP17.26■□□□□ 0.35
LIMS2-208ENST00000410011 PTPRFP10586 1907 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 C2orf71A6NGG8 1288 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 METTL18O95568 372 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 CYP2F1P24903 491 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 L1CAMP32004 1257 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 GCLCP48506 637 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-208ENST00000410011 CA9Q16790 459 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 GOLGA7BQ2TAP0 167 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 CES4AQ5XG92 561 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 CCNJLQ8IV13 435 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 HACE1Q8IYU2 909 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 PDCD7Q8N8D1 485 aaKnown RBP17.26■□□□□ 0.35
LIMS2-208ENST00000410011 ZNF668Q96K58 619 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-208ENST00000410011 ARMCX1Q9P291 453 aa17.26■□□□□ 0.35
LIMS2-208ENST00000410011 BRCA1P38398 1863 aaKnown RBP17.25■□□□□ 0.35
LIMS2-208ENST00000410011 DPPA5A6NC42 116 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 SPECC1L-ADORA2AF8WAN1 911 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 SKAP2O75563 359 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-208ENST00000410011 GRAP2O75791 330 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 CNMDO75829 334 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 AOC1P19801 751 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 STX3Q13277 289 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 NAB1Q13506 487 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 VGLL4Q14135 290 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 NBPF20Q3BBV1 942 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 FAXCQ5TGI0 409 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 SCUBE1Q8IWY4 988 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 RBM15BQ8NDT2 890 aaKnown RBP17.25■□□□□ 0.35
LIMS2-208ENST00000410011 QKIQ96PU8 341 aaKnown RBP eCLIP17.25■□□□□ 0.35
LIMS2-208ENST00000410011 VCXQ9H320 206 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 GGA3Q9NZ52 723 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 PPARGC1AQ9UBK2 798 aaKnown RBP17.25■□□□□ 0.35
LIMS2-208ENST00000410011 SDR42E2A6NKP2 422 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 UGT1A9O60656 530 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 CAPN15O75808 1086 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 ARF4P18085 180 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-208ENST00000410011 AQP5P55064 265 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 TRMT10BQ6PF06 316 aaKnown RBP17.25■□□□□ 0.35
LIMS2-208ENST00000410011 MARK2Q7KZI7 788 aaKnown RBP17.25■□□□□ 0.35
LIMS2-208ENST00000410011 TTC30AQ86WT1 665 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 ADGRF2Q8IZF7 708 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 TRPM4Q8TD43 1214 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 UGT1A7Q9HAW7 530 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 UGT1A10Q9HAW8 530 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 UGT1A8Q9HAW9 530 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 GPAMQ9HCL2 828 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 GPATCH2LQ9NWQ4 482 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 MORF4L1Q9UBU8 362 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 ANGPTL2Q9UKU9 493 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 DERAQ9Y315 318 aa17.25■□□□□ 0.35
LIMS2-208ENST00000410011 ZSWIM8A7E2V4 1837 aa17.24■□□□□ 0.35
LIMS2-208ENST00000410011 HACD1B0YJ81 288 aa17.24■□□□□ 0.35
LIMS2-208ENST00000410011 CYB561D2O14569 222 aa17.24■□□□□ 0.35
LIMS2-208ENST00000410011 PAPSS1O43252 624 aaPredicted RBP17.24■□□□□ 0.35
LIMS2-208ENST00000410011 GSRP00390 522 aa17.24■□□□□ 0.35
LIMS2-208ENST00000410011 FDFT1P37268 417 aa17.24■□□□□ 0.35
LIMS2-208ENST00000410011 RPL34P49207 117 aaKnown RBP17.24■□□□□ 0.35
LIMS2-208ENST00000410011 ACTR3P61158 418 aa17.24■□□□□ 0.35
LIMS2-208ENST00000410011 THOC5Q13769 683 aaKnown RBP17.24■□□□□ 0.35
LIMS2-208ENST00000410011 PPP1R26Q5T8A7 1209 aaPredicted RBP17.24■□□□□ 0.35
LIMS2-208ENST00000410011 C6orf163Q5TEZ5 329 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms