RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ADAM15Q13444 863 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 PRPF4BQ13523 1007 aaKnown RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 IQCB1Q15051 598 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 ASIC2Q16515 512 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 TBRG1Q3YBR2 411 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 DEPDC1Q5TB30 811 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 TRIM68Q6AZZ1 485 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 IL27RAQ6UWB1 636 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 Q6ZUG5 572 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 MED25Q71SY5 747 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 FAM124AQ86V42 546 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 CCDC105Q8IYK2 499 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 CARNMT1Q8N4J0 409 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 FSIP1Q8NA03 581 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 LSM14AQ8ND56 463 aaKnown RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 TMIEQ8NEW7 156 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 LINS1Q8NG48 757 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 LPPQ93052 612 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 ZDHHC12Q96GR4 267 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 RBM17Q96I25 401 aaKnown RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 GPATCH1Q9BRR8 931 aaKnown RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 ZCWPW1Q9H0M4 648 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 TAOK3Q9H2K8 898 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 RMI1Q9H9A7 625 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 ERVMER34-1Q9H9K5 563 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 PLEKHA2Q9HB19 425 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 XAB2Q9HCS7 855 aaKnown RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 LIN7CQ9NUP9 197 aaKnown RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 ZDHHC7Q9NXF8 308 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 DNAJB11Q9UBS4 358 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 RASAL2Q9UJF2 1139 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 BAG5Q9UL15 447 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 SHOC2Q9UQ13 582 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 PCDHGB5Q9Y5G0 923 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 ZFP37Q9Y6Q3 630 aaPredicted RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 ZMYM3Q14202 1370 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 C19orf81C9J6K1 198 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 E9PLN8 166 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 H0Y626 953 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 RGS10O43665 173 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 HTATSF1O43719 755 aaKnown RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 AGFG2O95081 481 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 TGDSO95455 350 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 CER1O95813 267 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 TUBB4AP04350 444 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 JUNP05412 331 aaKnown RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 QDPRP09417 244 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 FAM200BP0CF97 657 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 VSIG10L2P0DP72 767 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 ARL1P40616 181 aaPredicted RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 GPD2P43304 727 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 MEOX1P50221 254 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 EPHB4P54760 987 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 ADAM17P78536 824 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 PPARDQ03181 441 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 TOP3AQ13472 1001 aaPredicted RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 SMC1AQ14683 1233 aaKnown RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 CBWD5Q5RIA9 395 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 PLEKHS1Q5SXH7 462 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 ZNF362Q5T0B9 420 aaPredicted RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 DENND1BQ6P3S1 775 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 TRMT10BQ6PF06 316 aaKnown RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 SLFN11Q7Z7L1 901 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 REXO1L1PQ8IX06 675 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 OR8H3Q8N146 312 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 LRRC71Q8N4P6 559 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 SLC17A8Q8NDX2 589 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 GOT1L1Q8NHS2 421 aaPredicted RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 MBD3L2Q8NHZ7 208 aaPredicted RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 BPIFB1Q8TDL5 484 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 SCFD2Q8WU76 684 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 SNX21Q969T3 373 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 SLC7A6OSQ96CW6 309 aaPredicted RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 SLC46A1Q96NT5 459 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 GPR20Q99678 358 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 VKORC1Q9BQB6 163 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 FTOQ9C0B1 505 aaKnown RBP eCLIP5.33□□□□□ -1.56
LSM5-205ENST00000409952 INTS2Q9H0H0 1204 aaKnown RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 C2orf40Q9H1Z8 148 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 STN1Q9H668 368 aaKnown RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 SEL1LQ9UBV2 794 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 SLC25A10Q9UBX3 287 aaPredicted RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 GTF3C4Q9UKN8 822 aa5.33□□□□□ -1.56
LSM5-205ENST00000409952 RBM8AQ9Y5S9 174 aaKnown RBP5.33□□□□□ -1.56
LSM5-205ENST00000409952 GPRASP1Q5JY77 1395 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 FLT1P17948 1338 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 PJA2O43164 708 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 SRGAP2O75044 1071 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 CSPG5O95196 566 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 CYP1A1P04798 512 aaPredicted RBP5.32□□□□□ -1.56
LSM5-205ENST00000409952 ATXN1LP0C7T5 689 aaKnown RBP5.32□□□□□ -1.56
LSM5-205ENST00000409952 NFKBIAP25963 317 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 LRPAP1P30533 357 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 CSF2RBP32927 897 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 GRK5P34947 590 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 ATP6V1E1P36543 226 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 GZMKP49863 264 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 KYNUQ16719 465 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 BMP2KLQ5H9B9 411 aa5.32□□□□□ -1.56
LSM5-205ENST00000409952 ZNF449Q6P9G9 518 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms