RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 F11P03951 625 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 ZDHHC11BP0C7U3 371 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 PTPN9P43378 593 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
PMS1-204ENST00000409823 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
PMS1-204ENST00000409823 ARCQ7LC44 396 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 NIPA2Q8N8Q9 360 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 ING5Q8WYH8 240 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 CD101Q93033 1021 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 PRKD2Q9BZL6 878 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
PMS1-204ENST00000409823 DPYSL4O14531 572 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 PRPSAP2O60256 369 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 MOCS2O96007 188 aaPredicted RBP13.11□□□□□ -0.31
PMS1-204ENST00000409823 RALAP11233 206 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 SLC25A11Q02978 314 aaKnown RBP13.11□□□□□ -0.31
PMS1-204ENST00000409823 CLUL1Q15846 466 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 ZC3H12AQ5D1E8 599 aaKnown RBP13.11□□□□□ -0.31
PMS1-204ENST00000409823 PDZD4Q76G19 769 aaPredicted RBP13.11□□□□□ -0.31
PMS1-204ENST00000409823 ARHGAP18Q8N392 663 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 COG1Q8WTW3 980 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 SMG7Q92540 1137 aaKnown RBP13.11□□□□□ -0.31
PMS1-204ENST00000409823 HES6Q96HZ4 224 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 CAPZA3Q96KX2 299 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 SLITRK6Q9H5Y7 841 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 GKN1Q9NS71 199 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 SMARCAL1Q9NZC9 954 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 MARCH2Q9P0N8 246 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 ASB3Q9Y575 518 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 MUC3AQ02505 3323 aa13.11□□□□□ -0.31
PMS1-204ENST00000409823 I6L893 689 aaPredicted RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 PTPN2P17706 415 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 SLC1A1P43005 524 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 PABPC1LQ4VXU2 614 aaKnown RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 HECTD3Q5T447 861 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 DCAF12L1Q5VU92 463 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 ARL14EPQ8N8R7 260 aaPredicted RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 PPM1EQ8WY54 764 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 CENPIQ92674 756 aaPredicted RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 MS4A14Q96JA4 679 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 CLDND1Q9NY35 253 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 CLIC5Q9NZA1 410 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 UXTQ9UBK9 157 aaPredicted RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 DDX3YO15523 660 aaKnown RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 XYLBO75191 536 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 CD48P09326 243 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 PSEN1P49768 467 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 CA9Q16790 459 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 CYP4V2Q6ZWL3 525 aaPredicted RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 PYROXD2Q8N2H3 581 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 PDZD8Q8NEN9 1154 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 RNF25Q96BH1 459 aaPredicted RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 WDR6Q9NNW5 1121 aaKnown RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 COMMD8Q9NX08 183 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 ZDHHC7Q9NXF8 308 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 DPP7Q9UHL4 492 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
PMS1-204ENST00000409823 SNX10Q9Y5X0 201 aa13.1□□□□□ -0.31
PMS1-204ENST00000409823 SLC12A8A0AV02 714 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 RARAP10276 462 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 IRF1P10914 325 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 DESP17661 470 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 MAN1A1P33908 653 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 CTNNA1P35221 906 aaKnown RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 ATP5C1P36542 298 aaKnown RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 KCNQ1P51787 676 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 TEAD2Q15562 447 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 RHOT1Q8IXI2 618 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 RAPGEF5Q92565 580 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 TKTL2Q9H0I9 626 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 SMOC2Q9H3U7 446 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.09□□□□□ -0.31
PMS1-204ENST00000409823 CKMP06732 381 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 HNRNPA1P09651 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
PMS1-204ENST00000409823 PYGMP11217 842 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 HDCP19113 662 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 PEX5P50542 639 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 ZXDBP98169 803 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 PPP6R3Q5H9R7 873 aaPredicted RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 STRADAQ7RTN6 431 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 ANKS1BQ7Z6G8 1248 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 ADAT2Q7Z6V5 191 aaKnown RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 CCDC50Q8IVM0 306 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 ITFG1Q8TB96 612 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 SHKBP1Q8TBC3 707 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 MYLIPQ8WY64 445 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 MRPS31Q92665 395 aaKnown RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 CALR3Q96L12 384 aaKnown RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 OSBPL9Q96SU4 736 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 CDCA3Q99618 268 aaPredicted RBP13.09□□□□□ -0.31
PMS1-204ENST00000409823 TRIM62Q9BVG3 475 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 SNX12Q9UMY4 172 aa13.09□□□□□ -0.31
PMS1-204ENST00000409823 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms