RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 FBF1Q8TES7 1133 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 POPDC2Q9HBU9 364 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 CDH9Q9ULB4 789 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 TEX264Q9Y6I9 313 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 A0A0U1RQF3 1178 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 NRP1O14786 923 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 AP1G2O75843 785 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 KIAA0754O94854 1291 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 VIMP08670 466 aaKnown RBP20.87■□□□□ 0.93
USP39-204ENST00000409766 AMPD1P23109 780 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 ELK3P41970 407 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 SYCP2LQ5T4T6 812 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 ARHGEF18Q6ZSZ5 1173 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 HFE2Q6ZVN8 426 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 ZMIZ2Q8NF64 920 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 CKAP2Q8WWK9 683 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 CABS1Q96KC9 395 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 DHRS4Q9BTZ2 278 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 KLC2Q9H0B6 622 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 MLXIPLQ9NP71 852 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 TMEM30AQ9NV96 361 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 ETNK2Q9NVF9 386 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 DTLQ9NZJ0 730 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 SENP1Q9P0U3 644 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 STAP1Q9ULZ2 295 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 CHMP2BQ9UQN3 213 aa20.87■□□□□ 0.93
USP39-204ENST00000409766 TDRD15B5MCY1 1934 aaKnown RBP20.86■□□□□ 0.93
USP39-204ENST00000409766 FBXO21O94952 628 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 FYNP06241 537 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 PRKAR2AP13861 404 aaKnown RBP20.86■□□□□ 0.93
USP39-204ENST00000409766 ARL4AP40617 200 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 LPIN1Q14693 890 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 EFTUD2Q15029 972 aaKnown RBP eCLIP20.86■□□□□ 0.933e-8■■□□□ 13.7
USP39-204ENST00000409766 RAB41Q5JT25 222 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 KCNT2Q6UVM3 1135 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 C4orf22Q6V702 233 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 C10orf67Q8IYJ2 551 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 CCDC110Q8TBZ0 833 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 QKIQ96PU8 341 aaKnown RBP eCLIP20.86■□□□□ 0.93
USP39-204ENST00000409766 KCNK16Q96T55 309 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 FRMD8Q9BZ67 464 aaPredicted RBP20.86■□□□□ 0.93
USP39-204ENST00000409766 NKIRAS1Q9NYS0 192 aa20.86■□□□□ 0.93
USP39-204ENST00000409766 ZNF638Q14966 1978 aaKnown RBP20.86■□□□□ 0.93
USP39-204ENST00000409766 BRCA2P51587 3418 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 FAM47DPA6NHR8 397 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 M0QYT0 321 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 GCATO75600 419 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 ELNP15502 786 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 KRT15P19012 456 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 RABGGTBP53611 331 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 CACNA2D1P54289 1103 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 KLHL38Q2WGJ6 581 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 ADGRD1Q6QNK2 874 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 AGGF1Q8N302 714 aaeCLIP20.85■□□□□ 0.93
USP39-204ENST00000409766 OTUD6BQ8N6M0 293 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 MRRFQ96E11 262 aaKnown RBP20.85■□□□□ 0.93
USP39-204ENST00000409766 ULBP1Q9BZM6 244 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 TRABDQ9H4I3 376 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 ETNK1Q9HBU6 452 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 MFHAS1Q9Y4C4 1052 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 PTCH2Q9Y6C5 1203 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 PRPF4O43172 522 aaKnown RBP eCLIP20.85■□□□□ 0.93
USP39-204ENST00000409766 AVILO75366 819 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 ATP2A2P16615 1042 aaKnown RBP20.85■□□□□ 0.93
USP39-204ENST00000409766 SLC18A1P54219 525 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 DAOAP59103 153 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 FAXCQ5TGI0 409 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 PAXIP1Q6ZW49 1069 aaPredicted RBP20.85■□□□□ 0.93
USP39-204ENST00000409766 GPRIN1Q7Z2K8 1008 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 TAX1BP1Q86VP1 789 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 RNF169Q8NCN4 708 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 SGSM3Q96HU1 749 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 OLFM3Q96PB7 478 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 RTP3Q9BQQ7 232 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 KIF9Q9HAQ2 790 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 PRDM16Q9HAZ2 1276 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 CNGB3Q9NQW8 809 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 ARHGEF4Q9NR80 690 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 TMPRSS4Q9NRS4 437 aa20.85■□□□□ 0.93
USP39-204ENST00000409766 YJEFN3A6XGL0 299 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 E7ENQ6 273 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 DGKIO75912 1065 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 POMCP01189 267 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 PCSK1P29120 753 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 MAGEA9P43362 315 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 PTK7Q13308 1070 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 GDAP1Q8TB36 358 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 PAFAH2Q99487 392 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 ADAM2Q99965 735 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 PIGVQ9NUD9 493 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 RNF186Q9NXI6 227 aa20.84■□□□□ 0.93
USP39-204ENST00000409766 SYNJ2BP-COX16A0A087WUM0 186 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 TCP11X1B4DZS4 312 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 HHLA1C9JL84 531 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 I3L4J1 428 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 PIAS1O75925 651 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 APRTP07741 180 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 STX2P32856 288 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 DEUP1Q05D60 604 aa20.83■□□□□ 0.93
USP39-204ENST00000409766 TRIM71Q2Q1W2 868 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms