RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TMC7Q7Z402 723 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 BNIPLQ7Z465 357 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 MAATS1Q7Z4T9 603 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 MON1AQ86VX9 555 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 SPATA17Q96L03 361 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 KCTD15Q96SI1 283 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 C17orf80Q9BSJ5 609 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 TRIM62Q9BVG3 475 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 ZBP1Q9H171 429 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 WDR6Q9NNW5 1121 aaKnown RBP12.95□□□□□ -0.34
CHMP3-204ENST00000409727 RAB21Q9UL25 225 aa12.95□□□□□ -0.34
CHMP3-204ENST00000409727 CREB3O43889 395 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 CXCL14O95715 111 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 MYBL2P10244 700 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 H2AFXP16104 143 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-204ENST00000409727 IL4RP24394 825 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 ANKRD20A8PQ5CZ79 823 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 WDR93Q6P2C0 686 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 NPNTQ6UXI9 565 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 DDX42Q86XP3 938 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHMP3-204ENST00000409727 JAMLQ86YT9 394 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 C12orf50Q8NA57 414 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-204ENST00000409727 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-204ENST00000409727 CASP10Q92851 521 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 TCF25Q9BQ70 676 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 TKTL2Q9H0I9 626 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 DPH5Q9H2P9 285 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 ENTPD7Q9NQZ7 604 aa12.94□□□□□ -0.34
CHMP3-204ENST00000409727 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ARHGEF15O94989 841 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 MAP3K6O95382 1288 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 F9P00740 461 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 CNPP09543 421 aaKnown RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 CTSAP10619 480 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PECAM1P16284 738 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 GOT1P17174 413 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 GBP1P32455 592 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ELF1P32519 619 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 BMPR1AP36894 532 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 GGCXP38435 758 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PTGIRP43119 386 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 MAGEA10P43363 369 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ALDH1A3P47895 512 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 FNTAP49354 379 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 OTUD4Q01804 1114 aaKnown RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 RAB33AQ14088 237 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PPP1R7Q15435 360 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 TRIP13Q15645 432 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 TAF12Q16514 161 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 DPYSL2Q16555 572 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 TAZQ16635 292 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 EFHC2Q5JST6 749 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 RASIP1Q5U651 963 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PLPP4Q5VZY2 271 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 TPGS2Q68CL5 300 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 C1orf228Q6PIY5 440 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 B4GALNT4Q76KP1 1039 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 IFT20Q8IY31 132 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 CASKIN2Q8WXE0 1202 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 GDAP1L1Q96MZ0 367 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 RNF157Q96PX1 679 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 C10orf88Q9H8K7 445 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 TLR8Q9NR97 1041 aaKnown RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 RRN3Q9NYV6 651 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PCYOX1Q9UHG3 505 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 FBXW11Q9UKB1 542 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 DNPEPQ9ULA0 475 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 UTP11Q9Y3A2 253 aaKnown RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 YIPF1Q9Y548 306 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 SNX10Q9Y5X0 201 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PLXNA4Q9HCM2 1894 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 I6L893 689 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 LIASO43766 372 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ECEL1O95672 775 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 TBX18O95935 607 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 RARGP13631 454 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ADRA1BP35368 520 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ERVFC1P60507 584 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 TWF1Q12792 350 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 EFEMP1Q12805 493 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 DHX34Q14147 1143 aaKnown RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 SHHQ15465 462 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 CCNG2Q16589 344 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ARL13BQ3SXY8 428 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 BBS12Q6ZW61 710 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 GSTA5Q7RTV2 222 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PRUNE1Q86TP1 453 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 MIB1Q86YT6 1006 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ARHGAP18Q8N392 663 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 CCDC33Q8N5R6 958 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PCDH19Q8TAB3 1148 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ACTL9Q8TC94 416 aa12.93□□□□□ -0.34
CHMP3-204ENST00000409727 PGAP3Q96FM1 320 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-204ENST00000409727 ZNF512Q96ME7 567 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms