RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 TLR8Q9NR97 1041 aaKnown RBP16.3■□□□□ 0.2
SHANK2-204ENST00000409530 STK39Q9UEW8 545 aa16.3■□□□□ 0.2
SHANK2-204ENST00000409530 SNX10Q9Y5X0 201 aa16.3■□□□□ 0.2
SHANK2-204ENST00000409530 RRP9O43818 475 aaKnown RBP16.29■□□□□ 0.2
SHANK2-204ENST00000409530 TADA3O75528 432 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 ACAP1Q15027 740 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 STRADAQ7RTN6 431 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 POLNQ7Z5Q5 900 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 SLC13A5Q86YT5 568 aaPredicted RBP16.29■□□□□ 0.2
SHANK2-204ENST00000409530 TCEAL8Q8IYN2 117 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 TDHQ8IZJ6 230 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 EXD1Q8NHP7 514 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 ACTRT1Q8TDG2 376 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 RBM41Q96IZ5 413 aaKnown RBP16.29■□□□□ 0.2
SHANK2-204ENST00000409530 KRT12Q99456 494 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 OSBPL8Q9BZF1 889 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 TRPC7Q9HCX4 862 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 ANLNQ9NQW6 1124 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 MAN1C1Q9NR34 630 aa16.29■□□□□ 0.2
SHANK2-204ENST00000409530 DDX56Q9NY93 547 aaKnown RBP16.29■□□□□ 0.2
SHANK2-204ENST00000409530 CREB3O43889 395 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 ERVK-21P61565 698 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 SNX1Q13596 522 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 ELF2Q15723 593 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 SND1Q7KZF4 910 aaKnown RBP eCLIP16.28■□□□□ 0.2
SHANK2-204ENST00000409530 ARCQ7LC44 396 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 RFX6Q8HWS3 928 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 RASGEF1CQ8N431 466 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 CENPIQ92674 756 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-204ENST00000409530 ZNF334Q9HCZ1 680 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-204ENST00000409530 FBXW11Q9UKB1 542 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 H3BNC9 293 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 TLR5O60602 858 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 MAP3K6O95382 1288 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 CSH1P0DML2 217 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 CSH2P0DML3 217 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 HMGA1P17096 107 aaKnown RBP16.28■□□□□ 0.2
SHANK2-204ENST00000409530 GJA1P17302 382 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 KDELR1P24390 212 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 CLCN4P51793 760 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 TERF1P54274 439 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 ERMARDQ5T6L9 678 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 LRRC38Q5VT99 294 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 DNAJB7Q7Z6W7 309 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-204ENST00000409530 HS6ST3Q8IZP7 471 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 CCDC33Q8N5R6 958 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 C1orf54Q8WWF1 131 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 TKTL2Q9H0I9 626 aa16.28■□□□□ 0.2
SHANK2-204ENST00000409530 SAE1Q9UBE0 346 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-204ENST00000409530 DOCK6Q96HP0 2047 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 CES2O00748 559 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 SCAMP3O14828 347 aaKnown RBP16.27■□□□□ 0.2
SHANK2-204ENST00000409530 RB1P06400 928 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 UBE3AQ05086 875 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 RAB30Q15771 203 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 RCOR2Q8IZ40 523 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 ZDHHC14Q8IZN3 488 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 SCML4Q8N228 414 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 NT5C3BQ969T7 300 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 KCTD15Q96SI1 283 aaPredicted RBP16.27■□□□□ 0.2
SHANK2-204ENST00000409530 CORO1BQ9BR76 489 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 SIK2Q9H0K1 926 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 WDCPQ9H6R7 721 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 WDR6Q9NNW5 1121 aaKnown RBP16.27■□□□□ 0.2
SHANK2-204ENST00000409530 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.27■□□□□ 0.2
SHANK2-204ENST00000409530 HCFC1R1Q9NWW0 138 aa16.27■□□□□ 0.2
SHANK2-204ENST00000409530 C2orf78A6NCI8 922 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 I6L893 689 aaPredicted RBP16.27■□□□□ 0.19
SHANK2-204ENST00000409530 IRAK2O43187 625 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 IRF1P10914 325 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 CDKN2BP42772 138 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 CYP4F8P98187 520 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 DPYSL3Q14195 570 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 TFDP3Q5H9I0 405 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 PPM1LQ5SGD2 360 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 ARHGAP18Q8N392 663 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 NETO2Q8NC67 525 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 UBXN4Q92575 508 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 TRIM62Q9BVG3 475 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 SMOC2Q9H3U7 446 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 PCDH18Q9HCL0 1135 aa16.27■□□□□ 0.19
SHANK2-204ENST00000409530 R3HDM2Q9Y2K5 976 aaKnown RBP16.27■□□□□ 0.19
SHANK2-204ENST00000409530 hCG_1818297A0A087WSY0 165 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 GOLGA6L10A0A0M3HER8 536 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 C3orf70A6NLC5 250 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-204ENST00000409530 MYL4P12829 197 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 GOT1P17174 413 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 GTF2F1P35269 517 aaKnown RBP eCLIP16.26■□□□□ 0.197e-7■■■■■ 30.9
SHANK2-204ENST00000409530 CETN2P41208 172 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 NRIP1P48552 1158 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 SLC7A5Q01650 507 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 EFHC2Q5JST6 749 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 FAM182AQ5T1J6 154 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 B4GALNT4Q76KP1 1039 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-204ENST00000409530 IGFLR1Q9H665 355 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 TRPM5Q9NZQ8 1165 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 MARCH2Q9P0N8 246 aa16.26■□□□□ 0.19
SHANK2-204ENST00000409530 XPO7Q9UIA9 1087 aaKnown RBP16.26■□□□□ 0.19
SHANK2-204ENST00000409530 FZD10Q9ULW2 581 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms