RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ANO4Q32M45 955 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 LONRF3Q496Y0 759 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 APTXQ7Z2E3 356 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 RNF10Q8N5U6 811 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 KYQ8NBH2 561 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 FBXO15Q8NCQ5 510 aaPredicted RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 SPATA20Q8TB22 786 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 HDAC7Q8WUI4 952 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 GAB3Q8WWW8 586 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 RAPGEF5Q92565 580 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 GFM2Q969S9 779 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 GSDMAQ96QA5 445 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 LRRC1Q9BTT6 524 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 FAM129AQ9BZQ8 928 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CSRNP2Q9H175 543 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CCDC134Q9H6E4 229 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 SAMSN1Q9NSI8 373 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 IL1RAPL1Q9NZN1 696 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 HDAC6Q9UBN7 1215 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 PAIP2BQ9ULR5 123 aaKnown RBP5.79□□□□□ -1.48
CLK1-202ENST00000409403 USP18Q9UMW8 372 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 ZBTB1Q9Y2K1 713 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 CDY2AQ9Y6F7 541 aa5.79□□□□□ -1.48
CLK1-202ENST00000409403 REV3LO60673 3130 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 ZNF318Q5VUA4 2279 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 DPPA5A6NC42 116 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 CES2O00748 559 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 CYP7B1O75881 506 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 BMP15O95972 392 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 CELA3BP08861 270 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 CCL5P13501 91 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 IDO1P14902 403 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 NPR1P16066 1061 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 ITGB8P26012 769 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 GPR15P49685 360 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 COPB1P53618 953 aaKnown RBP5.78□□□□□ -1.48
CLK1-202ENST00000409403 MRPS5P82675 430 aaKnown RBP5.78□□□□□ -1.48
CLK1-202ENST00000409403 CD83Q01151 205 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 CUL4BQ13620 913 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 RTP5Q14D33 572 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 PTPAQ15257 358 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 GFOD2Q3B7J2 385 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 KBTBD12Q3ZCT8 623 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 USH1GQ495M9 461 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 Q4G0T1 1027 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 SLC9C2Q5TAH2 1124 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 MCM10Q7L590 875 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 BMP8AQ7Z5Y6 402 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 TBC1D1Q86TI0 1168 aaPredicted RBP5.78□□□□□ -1.48
CLK1-202ENST00000409403 CCDC65Q8IXS2 484 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 LRRC43Q8N309 656 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 STKLD1Q8NE28 680 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 DIS3LQ8TF46 1054 aaKnown RBP5.78□□□□□ -1.48
CLK1-202ENST00000409403 TSPEARQ8WU66 669 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 U2AF1L4Q8WU68 220 aaKnown RBP5.78□□□□□ -1.48
CLK1-202ENST00000409403 WASF1Q92558 559 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 PPP2R3CQ969Q6 453 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 ZNF653Q96CK0 615 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 KLHL29Q96CT2 875 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 HIST1H2AHQ96KK5 128 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 AIFM3Q96NN9 605 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 OLFM3Q96PB7 478 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 GBP5Q96PP8 586 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 XPO6Q96QU8 1125 aaKnown RBP5.78□□□□□ -1.48
CLK1-202ENST00000409403 NAP1L3Q99457 506 aaPredicted RBP5.78□□□□□ -1.48
CLK1-202ENST00000409403 HIST1H2AJQ99878 128 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 ARHGAP39Q9C0H5 1083 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 MAF1Q9H063 256 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 GCM1Q9NP62 436 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 HELLSQ9NRZ9 838 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 RMND1Q9NWS8 449 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 GABBR1Q9UBS5 961 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 CROTQ9UKG9 612 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 CAPN11Q9UMQ6 739 aa5.78□□□□□ -1.48
CLK1-202ENST00000409403 SCAF8Q9UPN6 1271 aaKnown RBP5.78□□□□□ -1.48
CLK1-202ENST00000409403 LAMA4Q16363 1823 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 DTNBO60941 627 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 SRGAP2O75044 1071 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 ATP2C2O75185 946 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 ATP6V1G1O75348 118 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 SUN1O94901 812 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 HEXIM1O94992 359 aaKnown RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 TFRCP02786 760 aaKnown RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 CHGBP05060 677 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 GJB1P08034 283 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 CYP21A2P08686 494 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 PHKG2P15735 406 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 SP100P23497 879 aaPredicted RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 MARCKSP29966 332 aaPredicted RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 CTNNA1P35221 906 aaKnown RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 MSH2P43246 934 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 LIMS1P48059 325 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 PDE6CP51160 858 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 POLE2P56282 527 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 BYSLQ13895 437 aaKnown RBP5.77□□□□□ -1.49
CLK1-202ENST00000409403 KRT31Q15323 416 aa5.77□□□□□ -1.49
CLK1-202ENST00000409403 SAFBQ15424 915 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLK1-202ENST00000409403 DGKDQ16760 1214 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms