RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 GEN1Q17RS7 908 aa13.58□□□□□ -0.24
CHRNA1-203ENST00000409219 KCNT1Q5JUK3 1230 aa13.58□□□□□ -0.24
CHRNA1-203ENST00000409219 BAP1Q92560 729 aa13.58□□□□□ -0.24
CHRNA1-203ENST00000409219 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHRNA1-203ENST00000409219 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.58□□□□□ -0.24
CHRNA1-203ENST00000409219 PCDHGA1Q9Y5H4 931 aa13.58□□□□□ -0.24
CHRNA1-203ENST00000409219 AK5Q9Y6K8 562 aa13.58□□□□□ -0.24
CHRNA1-203ENST00000409219 PLXNA2O75051 1894 aa13.58□□□□□ -0.24
CHRNA1-203ENST00000409219 CAPN8A6NHC0 703 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 A8MXQ7 604 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 CBX4O00257 560 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 NPC1O15118 1278 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 ACSL1P33121 698 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 CTSKP43235 329 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 MFAP3P55082 362 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 TLE3Q04726 772 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 TEAD4Q15561 434 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 DUOXA2Q1HG44 320 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 INAVAQ3KP66 663 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 CBWD2Q8IUF1 395 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 WDR49Q8IV35 697 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 SYCP3Q8IZU3 236 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 DNAJC19Q96DA6 116 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 OSGEPQ9NPF4 335 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 DMAP1Q9NPF5 467 aaPredicted RBP13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 OLFML3Q9NRN5 406 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 LSM7Q9UK45 103 aaKnown RBP13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 SLC27A6Q9Y2P4 619 aa13.57□□□□□ -0.24
CHRNA1-203ENST00000409219 PYCARD-AS1I3L0S3 204 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 ERVH48-1M5A8F1 160 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 ENC1O14682 589 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 CST3P01034 146 aaPredicted RBP13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 GAP43P17677 238 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 PRKCHP24723 683 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 CDH8P55286 799 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 CXADRP78310 365 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 TARDBPQ13148 414 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 ORC1Q13415 861 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 ZNF234Q14588 700 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 HES3Q5TGS1 186 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 Q6ZNB5 142 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 TRAPPC11Q7Z392 1133 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 NRSN2Q9GZP1 204 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 CLMPQ9H6B4 373 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 UPF2Q9HAU5 1272 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 CYLDQ9NQC7 956 aa13.56□□□□□ -0.24
CHRNA1-203ENST00000409219 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 SYNCRIPO60506 623 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 RFPL3O75679 317 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 PENKP01210 267 aaPredicted RBP13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 FAM163BP0C2L3 166 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 LONP1P36776 959 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 ACADVLP49748 655 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 TNNC1P63316 161 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 SURF1Q15526 300 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 WDR72Q3MJ13 1102 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 SPACA3Q8IXA5 215 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 ZMIZ2Q8NF64 920 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 BIRC7Q96CA5 298 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 SMARCD1Q96GM5 515 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 MED10Q9BTT4 135 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 KRT82Q9NSB4 513 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 COMMD8Q9NX08 183 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 OSER1Q9NX31 292 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 PTPN13Q12923 2485 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 ATP8B3O60423 1300 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 A0A1B0GTQ1 180 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 MDM4O15151 490 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 EPHX1P07099 455 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 ATP5C1P36542 298 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 GOLGA8FQ08AF8 430 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 GOLGA8DPQ0D2H9 430 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 CCDC173Q0VFZ6 552 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 TAF1BQ53T94 588 aaPredicted RBP13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 FYB2Q5VWT5 728 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 FBXL19Q6PCT2 694 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 USP49Q70CQ1 688 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 RBBP8NLQ8NC74 664 aaPredicted RBP13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 UCMAQ8WVF2 138 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 FGF11Q92914 225 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 ZSCAN31Q96LW9 406 aaPredicted RBP13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 ORAI3Q9BRQ5 295 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 SEMA4CQ9C0C4 833 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 LHX5Q9H2C1 402 aa13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 TLR8Q9NR97 1041 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-203ENST00000409219 ZNF233A6NK53 670 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 KIAA0391O15091 583 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 BRINP1O60477 761 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 AP1G2O75843 785 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 BEST1O76090 585 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 ALCAMQ13740 583 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 ANKS1BQ7Z6G8 1248 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 ADAT2Q7Z6V5 191 aaKnown RBP13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 ERICH1Q86X53 443 aa13.54□□□□□ -0.24
CHRNA1-203ENST00000409219 FUKQ8N0W3 1084 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms