RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SERPINB11Q96P15 392 aa21.32■■□□□ 1
CHKB-201ENST00000406938 CDK5RAP1Q96SZ6 601 aaKnown RBP21.32■■□□□ 1
CHKB-201ENST00000406938 PRKD2Q9BZL6 878 aa21.32■■□□□ 1
CHKB-201ENST00000406938 WDR6Q9NNW5 1121 aaKnown RBP21.32■■□□□ 1
CHKB-201ENST00000406938 KLHL11Q9NVR0 708 aa21.32■■□□□ 1
CHKB-201ENST00000406938 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.32■■□□□ 1
CHKB-201ENST00000406938 SAR1BQ9Y6B6 198 aa21.32■■□□□ 1
CHKB-201ENST00000406938 CCDC195A0A1B0GUA6 201 aa21.31■■□□□ 1
CHKB-201ENST00000406938 URI1O94763 535 aaPredicted RBP21.31■■□□□ 1
CHKB-201ENST00000406938 GLP2RO95838 553 aa21.31■■□□□ 1
CHKB-201ENST00000406938 F9P00740 461 aa21.31■■□□□ 1
CHKB-201ENST00000406938 KRT7P08729 469 aa21.31■■□□□ 1
CHKB-201ENST00000406938 POU2F2P09086 479 aa21.31■■□□□ 1
CHKB-201ENST00000406938 MYL4P12829 197 aa21.31■■□□□ 1
CHKB-201ENST00000406938 TUBP50607 506 aa21.31■■□□□ 1
CHKB-201ENST00000406938 RWDD2BP57060 319 aa21.31■■□□□ 1
CHKB-201ENST00000406938 EIF4EBP2Q13542 120 aaPredicted RBP21.31■■□□□ 1
CHKB-201ENST00000406938 ATP13A4Q4VNC1 1196 aa21.31■■□□□ 1
CHKB-201ENST00000406938 KCNT1Q5JUK3 1230 aa21.31■■□□□ 1
CHKB-201ENST00000406938 HECTD3Q5T447 861 aa21.31■■□□□ 1
CHKB-201ENST00000406938 TADA2BQ86TJ2 420 aa21.31■■□□□ 1
CHKB-201ENST00000406938 SFXN1Q9H9B4 322 aa21.31■■□□□ 1
CHKB-201ENST00000406938 DZANK1Q9NVP4 752 aa21.31■■□□□ 1
CHKB-201ENST00000406938 LMCD1Q9NZU5 365 aa21.31■■□□□ 1
CHKB-201ENST00000406938 DNMT3BQ9UBC3 853 aaKnown RBP21.31■■□□□ 1
CHKB-201ENST00000406938 RASAL2Q9UJF2 1139 aa21.31■■□□□ 1
CHKB-201ENST00000406938 C2orf78A6NCI8 922 aa21.3■■□□□ 1
CHKB-201ENST00000406938 COCHO43405 550 aa21.3■■□□□ 1
CHKB-201ENST00000406938 OAS1P00973 400 aaKnown RBP21.3■■□□□ 1
CHKB-201ENST00000406938 PTPN2P17706 415 aa21.3■■□□□ 1
CHKB-201ENST00000406938 TCP1P17987 556 aaKnown RBP21.3■■□□□ 1
CHKB-201ENST00000406938 CDC25CP30307 473 aa21.3■■□□□ 1
CHKB-201ENST00000406938 GBP1P32455 592 aa21.3■■□□□ 1
CHKB-201ENST00000406938 EPHA5P54756 1037 aa21.3■■□□□ 1
CHKB-201ENST00000406938 MIB1Q86YT6 1006 aa21.3■■□□□ 1
CHKB-201ENST00000406938 KATNAL2Q8IYT4 538 aa21.3■■□□□ 1
CHKB-201ENST00000406938 ZNF276Q8N554 614 aa21.3■■□□□ 1
CHKB-201ENST00000406938 CCDC185Q8N715 623 aa21.3■■□□□ 1
CHKB-201ENST00000406938 EFHBQ8N7U6 833 aa21.3■■□□□ 1
CHKB-201ENST00000406938 C12orf76Q8N812 135 aaPredicted RBP21.3■■□□□ 1
CHKB-201ENST00000406938 COG1Q8WTW3 980 aa21.3■■□□□ 1
CHKB-201ENST00000406938 LRCH3Q96II8 777 aa21.3■■□□□ 1
CHKB-201ENST00000406938 MARCH2Q9P0N8 246 aa21.3■■□□□ 1
CHKB-201ENST00000406938 A0A1W2PRU2 124 aa21.29■■□□□ 1
CHKB-201ENST00000406938 NRG2O14511 850 aaPredicted RBP21.29■■□□□ 1
CHKB-201ENST00000406938 LINC01565O15544 149 aa21.29■■□□□ 1
CHKB-201ENST00000406938 KRT1P04264 644 aa21.29■■□□□ 1
CHKB-201ENST00000406938 RHOP08100 348 aa21.29■■□□□ 1
CHKB-201ENST00000406938 RARAP10276 462 aa21.29■■□□□ 1
CHKB-201ENST00000406938 PRLRP16471 622 aa21.29■■□□□ 1
CHKB-201ENST00000406938 CCR2P41597 374 aa21.29■■□□□ 1
CHKB-201ENST00000406938 CXCR3P49682 368 aa21.29■■□□□ 1
CHKB-201ENST00000406938 CYP4F8P98187 520 aa21.29■■□□□ 1
CHKB-201ENST00000406938 ZNF211Q13398 564 aaPredicted RBP21.29■■□□□ 1
CHKB-201ENST00000406938 ZFYVE27Q5T4F4 411 aa21.29■■□□□ 1
CHKB-201ENST00000406938 PDZD4Q76G19 769 aaPredicted RBP21.29■■□□□ 1
CHKB-201ENST00000406938 SND1Q7KZF4 910 aaKnown RBP eCLIP21.29■■□□□ 1
CHKB-201ENST00000406938 HSPH1Q92598 858 aa21.29■■□□□ 1
CHKB-201ENST00000406938 GCNAQ96QF7 691 aa21.29■■□□□ 1
CHKB-201ENST00000406938 SNRNP25Q9BV90 132 aaKnown RBP21.29■■□□□ 1
CHKB-201ENST00000406938 NACA2Q9H009 215 aa21.29■■□□□ 1
CHKB-201ENST00000406938 CARD9Q9H257 536 aa21.29■■□□□ 1
CHKB-201ENST00000406938 ATXN3LQ9H3M9 355 aa21.29■■□□□ 1
CHKB-201ENST00000406938 ZNF185O15231 689 aa21.29■■□□□ 1
CHKB-201ENST00000406938 ATP5C1P36542 298 aaKnown RBP21.29■■□□□ 1
CHKB-201ENST00000406938 KLHDC10Q6PID8 442 aa21.29■■□□□ 1
CHKB-201ENST00000406938 TMC5Q6UXY8 1006 aa21.29■■□□□ 1
CHKB-201ENST00000406938 TEKT4Q8WW24 435 aa21.29■■□□□ 1
CHKB-201ENST00000406938 MRPS31Q92665 395 aaKnown RBP21.29■■□□□ 1
CHKB-201ENST00000406938 TRPC7Q9HCX4 862 aa21.29■■□□□ 1
CHKB-201ENST00000406938 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.29■■□□□ 1
CHKB-201ENST00000406938 GPATCH2LQ9NWQ4 482 aa21.29■■□□□ 1
CHKB-201ENST00000406938 DDX56Q9NY93 547 aaKnown RBP21.29■■□□□ 1
CHKB-201ENST00000406938 DNMT3LQ9UJW3 386 aa21.29■■□□□ 1
CHKB-201ENST00000406938 TLR6Q9Y2C9 796 aa21.29■■□□□ 1
CHKB-201ENST00000406938 MTCH2Q9Y6C9 303 aa21.29■■□□□ 1
CHKB-201ENST00000406938 MYO9BQ13459 2157 aa21.28■■□□□ 1
CHKB-201ENST00000406938 PAPLNO95428 1278 aa21.28■■□□□ 1
CHKB-201ENST00000406938 FGF19O95750 216 aa21.28■■□□□ 1
CHKB-201ENST00000406938 PYGMP11217 842 aa21.28■■□□□ 1
CHKB-201ENST00000406938 GJA1P17302 382 aa21.28■■□□□ 1
CHKB-201ENST00000406938 NNTQ13423 1086 aa21.28■■□□□ 1
CHKB-201ENST00000406938 ADGRE1Q14246 886 aa21.28■■□□□ 1
CHKB-201ENST00000406938 BOLA3Q53S33 107 aa21.28■■□□□ 1
CHKB-201ENST00000406938 TXNDC8Q6A555 127 aa21.28■■□□□ 1
CHKB-201ENST00000406938 TMEM184AQ6ZMB5 413 aa21.28■■□□□ 1
CHKB-201ENST00000406938 GRASPQ7Z6J2 395 aaPredicted RBP21.28■■□□□ 1
CHKB-201ENST00000406938 LEMD2Q8NC56 503 aa21.28■■□□□ 1
CHKB-201ENST00000406938 CMASQ8NFW8 434 aaPredicted RBP21.28■■□□□ 1
CHKB-201ENST00000406938 SMG7Q92540 1137 aaKnown RBP21.28■■□□□ 1
CHKB-201ENST00000406938 RNF34Q969K3 372 aa21.28■■□□□ 1
CHKB-201ENST00000406938 FAM161BQ96MY7 647 aa21.28■■□□□ 1
CHKB-201ENST00000406938 ANLNQ9NQW6 1124 aa21.28■■□□□ 1
CHKB-201ENST00000406938 TMPRSS4Q9NRS4 437 aa21.28■■□□□ 1
CHKB-201ENST00000406938 AP4E1Q9UPM8 1137 aa21.28■■□□□ 1
CHKB-201ENST00000406938 OBSL1O75147 1896 aa21.28■■□□□ 1
CHKB-201ENST00000406938 SZT2Q5T011 3432 aa21.28■■□□□ 1
CHKB-201ENST00000406938 PI4K2BG5E9Z4 385 aa21.27■■□□□ 1
CHKB-201ENST00000406938 SRGAP2BP0DMP2 458 aa21.27■■□□□ 1
CHKB-201ENST00000406938 NTHL1P78549 312 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms