RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 HMBSP08397 361 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 SETSIPP0DME0 302 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 VDRP11473 427 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 COG7P83436 770 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 PKDCCQ504Y2 493 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 EGFLAMQ63HQ2 1017 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 PM20D1Q6GTS8 502 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 TCEAL6Q6IPX3 200 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 NUDT18Q6ZVK8 323 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 TRIM59Q8IWR1 403 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 PPM1KQ8N3J5 372 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 C12orf50Q8NA57 414 aaPredicted RBP16.11■□□□□ 0.17
TPM1-207ENST00000403994 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 KCNV2Q8TDN2 545 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 TFAP2BQ92481 460 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 TCEAL3Q969E4 200 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 RXFP3Q9NSD7 469 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 PLK2Q9NYY3 685 aa16.11■□□□□ 0.17
TPM1-207ENST00000403994 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
TPM1-207ENST00000403994 CEP192Q8TEP8 1941 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 BCLAF3A2AJT9 711 aaKnown RBP16.1■□□□□ 0.17
TPM1-207ENST00000403994 PRRT4C9JH25 899 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 P4HA2O15460 535 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 PENKP01210 267 aaPredicted RBP16.1■□□□□ 0.17
TPM1-207ENST00000403994 PAEPP09466 180 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 HOXB2P14652 356 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 P2RY2P41231 377 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 DGKGP49619 791 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
TPM1-207ENST00000403994 STX17P56962 302 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 CREB5Q02930 508 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 ARHGEF19Q8IW93 802 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 SIX6OS1Q8N1H7 587 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 UBA3Q8TBC4 463 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 RLN3Q8WXF3 142 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 NDRG1Q92597 394 aaKnown RBP16.1■□□□□ 0.17
TPM1-207ENST00000403994 SPACA7Q96KW9 195 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 IPO9Q96P70 1041 aaKnown RBP16.1■□□□□ 0.17
TPM1-207ENST00000403994 ZSWIM1Q9BR11 485 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 LRRC4Q9HBW1 653 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 VPS45Q9NRW7 570 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 STRIP2Q9ULQ0 834 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.1■□□□□ 0.17
TPM1-207ENST00000403994 ZNF510Q9Y2H8 683 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 STARD13Q9Y3M8 1113 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 PCDHB4Q9Y5E5 795 aa16.1■□□□□ 0.17
TPM1-207ENST00000403994 TPRP12270 2363 aaKnown RBP16.09■□□□□ 0.17
TPM1-207ENST00000403994 CKAP5Q14008 2032 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 SLC12A8A0AV02 714 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 YJEFN3A6XGL0 299 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 E7ENQ6 273 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 M0QYV0 167 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 BRD2P25440 801 aaKnown RBP16.09■□□□□ 0.17
TPM1-207ENST00000403994 NTSR1P30989 418 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 ZNF132P52740 706 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 LIMK1P53667 647 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 GCNT1Q02742 428 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 CETN1Q12798 172 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 FYB2Q5VWT5 728 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 LCLAT1Q6UWP7 414 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 DENND1CQ8IV53 801 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 RBBP8NLQ8NC74 664 aaPredicted RBP16.09■□□□□ 0.17
TPM1-207ENST00000403994 KCTD13Q8WZ19 329 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 PLD4Q96BZ4 506 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 ACOX2Q99424 681 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 DCLK3Q9C098 648 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 CD248Q9HCU0 757 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 OLA1Q9NTK5 396 aaKnown RBP16.09■□□□□ 0.17
TPM1-207ENST00000403994 AGO1Q9UL18 857 aaKnown RBP16.09■□□□□ 0.17
TPM1-207ENST00000403994 KIAA1257Q9ULG3 409 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 FRYQ5TBA9 3013 aa16.09■□□□□ 0.17
TPM1-207ENST00000403994 A0A1W2PQF6 199 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 RNF225M0QZC1 329 aaPredicted RBP16.08■□□□□ 0.16
TPM1-207ENST00000403994 GNA14O95837 355 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 CALCAP01258 141 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 CISD3P0C7P0 127 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 GABRG2P18507 467 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 CHKAP35790 457 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 WASP42768 502 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 DAOAP59103 153 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 KCNH2Q12809 1159 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 MAP7D1Q3KQU3 841 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 RRAGAQ7L523 313 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 CYP2U1Q7Z449 544 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 FAM217AQ8IXS0 508 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 CHPFQ8IZ52 775 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 SCML4Q8N228 414 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 TRIML1Q8N9V2 468 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 EDEM1Q92611 657 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 GABRG3Q99928 467 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 INTS2Q9H0H0 1204 aaKnown RBP16.08■□□□□ 0.16
TPM1-207ENST00000403994 CNGB3Q9NQW8 809 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 CALCOCO1Q9P1Z2 691 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 MBD1Q9UIS9 605 aaPredicted RBP16.08■□□□□ 0.16
TPM1-207ENST00000403994 FBXO10Q9UK96 956 aa16.08■□□□□ 0.16
TPM1-207ENST00000403994 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.08■□□□□ 0.16
TPM1-207ENST00000403994 MSI1O43347 362 aaKnown RBP16.07■□□□□ 0.16
TPM1-207ENST00000403994 GABBR2O75899 941 aa16.07■□□□□ 0.16
TPM1-207ENST00000403994 CAVIN2O95810 425 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms