RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 LPIN3Q9BQK8 851 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 B3GNT5Q9BYG0 378 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 GRIP2Q9C0E4 1043 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 KLHL4Q9C0H6 718 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 S100A14Q9HCY8 104 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 NDC80O14777 642 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 CREB3O43889 395 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 RFPL1O75677 317 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 APOEP02649 317 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 ERVK-10P10266 1014 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 EIF4BP23588 611 aaKnown RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 NUDT2P50583 147 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 STAT5BP51692 787 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 GBE1Q04446 702 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 SPDYAQ5MJ70 313 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 PDPK2PQ6A1A2 396 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 NIPA1Q7RTP0 329 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 DHDDSQ86SQ9 333 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 PHTF2Q8N3S3 785 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 FAM172AQ8WUF8 416 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 AZIN2Q96A70 460 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 APOL2Q9BQE5 337 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 SPATA16Q9BXB7 569 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 OXCT2Q9BYC2 517 aaPredicted RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 MRPL4Q9BYD3 311 aaKnown RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 PORCNQ9H237 461 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 BTBD7Q9P203 1132 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 PAK5Q9P286 719 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 BPGMP07738 259 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 VCLP18206 1134 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 GPD1P21695 349 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 SOX11P35716 441 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 NAMPTP43490 491 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 MRPS22P82650 360 aaKnown RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 TAP1Q03518 808 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 MAP7Q14244 749 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 EEF1DP3Q658K8 133 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 SAMD7Q7Z3H4 446 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 XYLT1Q86Y38 959 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 ZBTB8OSQ8IWT0 167 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 ZSCAN18Q8TBC5 510 aaPredicted RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 PIWIL2Q8TC59 973 aaKnown RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 PPP1R13LQ8WUF5 828 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 WDR55Q9H6Y2 383 aaPredicted RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 ATAD5Q96QE3 1844 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 KLRG2A4D1S0 409 aaPredicted RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 WNT10BO00744 389 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 DNAJC6O75061 913 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 SIN3BO75182 1162 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 TGDSO95455 350 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 LSM8O95777 96 aaKnown RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 GLRBP48167 497 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 PDK3Q15120 406 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 CNGA3Q16281 694 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 MARK2Q7KZI7 788 aaKnown RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 CHSY1Q86X52 802 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 FAM156AQ8NDB6 213 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 FAM149B1Q96BN6 582 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 LRGUKQ96M69 825 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 TRAPPC9Q96Q05 1148 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 RPF1Q9H9Y2 349 aaKnown RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 ANLNQ9NQW6 1124 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 NRBP2Q9NSY0 501 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 A0A088AWK7 358 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 MAGEC1O60732 1142 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 NFICP08651 508 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 LCP1P13796 627 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 CD1EP15812 388 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 SCNN1BP51168 640 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 CLCN3P51790 818 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 FOLH1Q04609 750 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 SLC18A2Q05940 514 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 DYNC1I2Q13409 638 aaKnown RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 LY6KQ17RY6 165 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 ABHD15Q6UXT9 468 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 PLD5Q8N7P1 536 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 DNAAF3Q8N9W5 541 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 TTC16Q8NEE8 873 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 TMA16Q96EY4 203 aaKnown RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 MRIQ9BWK5 157 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 COPS7BQ9H9Q2 264 aaPredicted RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 CAB39LQ9H9S4 337 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 SSU72Q9NP77 194 aaKnown RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 THAP1Q9NVV9 213 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 MFHAS1Q9Y4C4 1052 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 SLC15A5A6NIM6 579 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 ABLIM1O14639 778 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 ATP9BO43861 1147 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 AMHP03971 560 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 MGAT1P26572 445 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 PMLP29590 882 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 SDC4P31431 198 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 CDK7P50613 346 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 PTPN11Q06124 597 aaPredicted RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 HEATR6Q6AI08 1181 aaKnown RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 RBM44Q6ZP01 1051 aaKnown RBP9.47□□□□□ -0.89
HPS4-203ENST00000402105 FRMD7Q6ZUT3 714 aa9.47□□□□□ -0.89
HPS4-203ENST00000402105 CAND1Q86VP6 1230 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms