RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 CLEC4CQ8WTT0 213 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 EDEM1Q92611 657 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 HSFY1Q96LI6 401 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 XPO6Q96QU8 1125 aaKnown RBP16.6■□□□□ 0.25
ATG4B-203ENST00000400772 DCLK3Q9C098 648 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 NUP62CLQ9H1M0 184 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 DNAJC17Q9NVM6 304 aaKnown RBP16.6■□□□□ 0.25
ATG4B-203ENST00000400772 PLK2Q9NYY3 685 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 SFMBT1Q9UHJ3 866 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 STRIP2Q9ULQ0 834 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 STARD13Q9Y3M8 1113 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 SDK1Q7Z5N4 2213 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 PRRT4C9JH25 899 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 PENKP01210 267 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-203ENST00000400772 PON1P27169 355 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 RPL34P49207 117 aaKnown RBP16.59■□□□□ 0.25
ATG4B-203ENST00000400772 DGKEP52429 567 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 TRIP4Q15650 581 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-203ENST00000400772 PREPLQ4J6C6 727 aaPredicted RBP16.59■□□□□ 0.25
ATG4B-203ENST00000400772 C10orf76Q5T2E6 689 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 FYB2Q5VWT5 728 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 GRAMD4Q6IC98 578 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 DENND1BQ6P3S1 775 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 FAM217AQ8IXS0 508 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 MDGA1Q8NFP4 955 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 KCNV2Q8TDN2 545 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 BHMTQ93088 406 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 ZC3H10Q96K80 434 aaKnown RBP16.59■□□□□ 0.25
ATG4B-203ENST00000400772 THAP9Q9H5L6 903 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 ACP6Q9NPH0 428 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 ABCC13Q9NSE7 274 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 OLA1Q9NTK5 396 aaKnown RBP16.59■□□□□ 0.25
ATG4B-203ENST00000400772 DMXL1Q9Y485 3027 aa16.59■□□□□ 0.25
ATG4B-203ENST00000400772 GTPBP10A4D1E9 387 aaKnown RBP16.58■□□□□ 0.24
ATG4B-203ENST00000400772 BECN2A8MW95 431 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 LRP3O75074 770 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 KRT5P13647 590 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 CHKAP35790 457 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 PLK5Q496M5 336 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 EOGTQ5NDL2 527 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 ANO7Q6IWH7 933 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 DPY19L2P1Q6NXN4 242 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 GBP6Q6ZN66 633 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 ZNF513Q8N8E2 541 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-203ENST00000400772 IRGQQ8WZA9 623 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 PLD4Q96BZ4 506 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 TPSD1Q9BZJ3 242 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 DUSP15Q9H1R2 295 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-203ENST00000400772 SIX2Q9NPC8 291 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 SEMA4GQ9NTN9 838 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 DLL3Q9NYJ7 618 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 AJAP1Q9UKB5 411 aaPredicted RBP16.58■□□□□ 0.24
ATG4B-203ENST00000400772 CLEC4EQ9ULY5 219 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 USP18Q9UMW8 372 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 INVSQ9Y283 1065 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 WDR87Q6ZQQ6 2873 aa16.58■□□□□ 0.24
ATG4B-203ENST00000400772 FYNP06241 537 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 ERCC5P28715 1186 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-203ENST00000400772 MTIF2P46199 727 aaKnown RBP16.57■□□□□ 0.24
ATG4B-203ENST00000400772 DGKGP49619 791 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 MFAP3P55082 362 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 EXOC3L4Q17RC7 722 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 RSPO4Q2I0M5 234 aaPredicted RBP16.57■□□□□ 0.24
ATG4B-203ENST00000400772 MIIPQ5JXC2 388 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 EGFLAMQ63HQ2 1017 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 ENOSF1Q7L5Y1 443 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 CPXM2Q8N436 756 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 OLIG1Q8TAK6 271 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 RNF139Q8WU17 664 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 ZNF606Q8WXB4 792 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 LOXL4Q96JB6 756 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 ACOX2Q99424 681 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 ARRDC1-AS1Q9H2J1 176 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 APEX2Q9UBZ4 518 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 CYTH4Q9UIA0 394 aa16.57■□□□□ 0.24
ATG4B-203ENST00000400772 HBS1LQ9Y450 684 aaKnown RBP16.57■□□□□ 0.24
ATG4B-203ENST00000400772 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.57■□□□□ 0.24
ATG4B-203ENST00000400772 SPTBN4Q9H254 2564 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 SPAG17Q6Q759 2223 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 GFRA2O00451 464 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 MSI1O43347 362 aaKnown RBP16.56■□□□□ 0.24
ATG4B-203ENST00000400772 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-203ENST00000400772 EPN2O95208 641 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 LTFP02788 710 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 CSRP2Q16527 193 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 MAN2A1Q16706 1144 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 TPD52L1Q16890 204 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-203ENST00000400772 ARHGAP44Q17R89 818 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 MSANTD2Q6P1R3 559 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 NUDT18Q6ZVK8 323 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 SCUBE3Q8IX30 993 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 SHC3Q92529 594 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 SLC4A5Q9BY07 1137 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 MIS12Q9H081 205 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 CD248Q9HCU0 757 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 POLMQ9NP87 494 aaPredicted RBP16.56■□□□□ 0.24
ATG4B-203ENST00000400772 STOML2Q9UJZ1 356 aa16.56■□□□□ 0.24
ATG4B-203ENST00000400772 SLC27A6Q9Y2P4 619 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms